Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NM966_RS05265 Genome accession   NZ_CP101506
Coordinates   1037856..1038806 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain B12     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1032856..1043806
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM966_RS05245 (NM966_05235) - 1034091..1034573 (+) 483 WP_046343108.1 hypothetical protein -
  NM966_RS05250 (NM966_05240) - 1034604..1036043 (-) 1440 WP_169476044.1 PLP-dependent aminotransferase family protein -
  NM966_RS05255 (NM966_05245) - 1036187..1037356 (+) 1170 WP_017360232.1 MFS transporter -
  NM966_RS05260 (NM966_05250) - 1037419..1037697 (+) 279 WP_025207101.1 barstar family protein -
  NM966_RS05265 (NM966_05255) ceuB 1037856..1038806 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  NM966_RS05270 (NM966_05260) - 1038799..1039749 (+) 951 WP_008348643.1 iron chelate uptake ABC transporter family permease subunit -
  NM966_RS05275 (NM966_05265) - 1039740..1040498 (+) 759 WP_056705126.1 ABC transporter ATP-binding protein -
  NM966_RS05280 (NM966_05270) - 1040521..1041465 (+) 945 WP_191218909.1 siderophore ABC transporter substrate-binding protein -
  NM966_RS05285 (NM966_05275) - 1041604..1042560 (+) 957 WP_072368152.1 LCP family protein -
  NM966_RS05290 (NM966_05280) - 1042595..1043029 (-) 435 WP_035700181.1 hypothetical protein -
  NM966_RS05295 (NM966_05285) - 1043116..1043478 (-) 363 WP_017360224.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=710277 NM966_RS05265 WP_017366964.1 1037856..1038806(+) (ceuB) [Bacillus altitudinis strain B12]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=710277 NM966_RS05265 WP_017366964.1 1037856..1038806(+) (ceuB) [Bacillus altitudinis strain B12]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTGAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494