Detailed information NTG0710180

Bioinformatically predicted

Overview

• Name: ccrA
• Type: Machinery gene
• Locus tag: NMQ06_RS00195
• Genome accession: NZ_CP101472
• Coordinates: 47141..48490 (-)
• Length: 449 a.a.
• NCBI ID: WP_255156982.1
• Uniprot ID: -
• Organism: Staphylococcus equorum strain DX2
• Function: promote SCCmec transfer (predicted from homology) Homologous recombination

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
SCCmec	47141..48490	47141..48490	within	0

Gene organization within MGE regions

Location: 47141..48490

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NMQ06_RS00195 (NMQ06_00195)	ccrA	47141..48490 (-)	1350	WP_255156982.1	cassette chromosome recombinase CcrA	Machinery gene

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 52581.52 Da
• Isoelectric Point: 10.1168

>NTDB_id=710180 NMQ06_RS00195 WP_255156982.1 47141..48490(-) (ccrA) [Staphylococcus equorum strain DX2]
MKQAIGYLRQSTLKQQSLTAQKQTIQIVAKKHNIQHITFYSDKQSGRTDKRNGYKQITELIQQGQCDVLCCYRLNRLHRN
LKNALKLMKLCQKYHVHILSVHDGYFDMDKAFDRLKLNIFISLAELESDNIGEQVKNGIKEKAKQGKMITTHAPFGYHYH
NGTFTINKSEAPTVKAVFSYYLQGHGYKKIAQYLEADDKFIDRKPYQVRNIILNPNYCGRVINQYGQYENMFPAIVSTTI
YEEAQVTRTQKQVKRKPSENQLKQKIKCPYCYSTLTNMTIRKKNHTLRYYVCPQNLNASRFVCEFKGINAQELETSVLAT
CQDFFQKQQLYSKINHTIQQRLKRQRDIETKTTLNHEQLIEKLAQGKIDAETFREQTQSLHQQSKPISSISAYQIQRAFQ
NIIQQRFTLNMLYPYIDQIHITKKKMLVGIYFKNEPLNIVNQKTQSSIA

Nucleotide

• Length: 1350 bp

>NTDB_id=710180 NMQ06_RS00195 WP_255156982.1 47141..48490(-) (ccrA) [Staphylococcus equorum strain DX2]
ATGAAACAAGCCATTGGTTACTTACGTCAAAGTACACTCAAACAACAATCACTCACTGCACAGAAACAAACTATCCAAAT
AGTCGCCAAAAAACACAATATCCAACACATCACCTTTTATAGCGATAAGCAATCAGGGCGCACTGATAAGCGGAATGGTT
ATAAACAAATTACTGAACTGATTCAACAGGGACAATGTGACGTATTATGTTGCTATCGTCTGAATCGACTTCATCGTAAT
CTAAAAAATGCATTAAAACTCATGAAATTGTGTCAAAAATACCATGTCCATATCTTAAGCGTTCATGATGGCTACTTCGA
CATGGATAAAGCATTCGATCGGCTCAAACTCAATATTTTCATCAGCTTGGCCGAACTCGAATCAGATAATATTGGTGAAC
AAGTCAAAAATGGAATCAAAGAAAAAGCGAAACAAGGTAAAATGATTACAACACATGCACCCTTTGGGTATCACTATCAC
AATGGGACATTCACAATAAACAAGTCAGAAGCACCAACCGTAAAAGCTGTATTCAGTTACTATCTTCAGGGCCATGGCTA
TAAAAAAATTGCGCAATACTTAGAAGCTGATGATAAATTCATTGATCGTAAGCCCTATCAAGTGCGTAATATTATACTTA
ACCCTAATTACTGTGGCCGTGTTATCAATCAATACGGACAATATGAAAACATGTTCCCAGCTATTGTCAGTACAACGATA
TACGAAGAAGCTCAAGTTACCCGAACTCAGAAACAAGTCAAACGTAAGCCGTCAGAAAACCAACTCAAACAAAAAATCAA
ATGTCCTTATTGTTATTCAACACTAACTAATATGACCATTAGAAAAAAGAATCATACATTACGTTATTACGTCTGTCCTC
AAAATTTGAATGCATCTCGTTTTGTCTGTGAATTCAAGGGGATCAATGCACAAGAATTAGAAACAAGTGTTTTAGCGACT
TGTCAGGACTTCTTTCAAAAGCAACAGCTCTATTCAAAAATAAACCATACTATTCAACAACGACTCAAAAGACAAAGAGA
TATAGAAACTAAAACTACACTCAATCACGAGCAGCTGATAGAAAAATTAGCCCAAGGCAAAATTGATGCAGAAACGTTCA
GAGAACAAACGCAATCATTACATCAACAATCAAAACCTATATCATCAATCAGTGCGTATCAAATTCAAAGAGCGTTTCAA
AACATCATTCAACAACGTTTCACGCTAAACATGTTATACCCTTATATTGATCAAATTCATATCACAAAAAAGAAAATGCT
TGTTGGCATTTATTTCAAAAATGAACCCTTAAATATCGTCAATCAAAAAACACAATCATCGATTGCTTAA

Domains

Predicted by InterproScan.

• Resolvase, N terminal domain (Resolvase) (4-147)

• Recombinase zinc beta ribbon domain (Zn_ribbon_recom) (262-322)

• Recombinase (Recombinase) (169-249)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ccrA	Staphylococcus aureus COL	91.982	100	0.92
ccrA	Staphylococcus aureus N315	75.724	100	0.757