Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NM232_RS17815 Genome accession   NZ_CP101399
Coordinates   3329163..3329744 (+) Length   193 a.a.
NCBI ID   WP_017367156.1    Uniprot ID   A0AB39J8T9
Organism   Bacillus altitudinis strain HM-7     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 3324163..3334744
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS17790 - 3324828..3326006 (+) 1179 WP_255233758.1 N-acetyldiaminopimelate deacetylase -
  NM232_RS17795 - 3326057..3326299 (+) 243 WP_003211408.1 YkuS family protein -
  NM232_RS17800 - 3326324..3327133 (-) 810 WP_255233759.1 mechanosensitive ion channel family protein -
  NM232_RS17805 ahpA 3327405..3327947 (+) 543 WP_007498654.1 biofilm-specific peroxidase AhpA -
  NM232_RS17810 - 3328223..3328681 (+) 459 WP_008345174.1 TlpA disulfide reductase family protein -
  NM232_RS17815 rok 3329163..3329744 (+) 582 WP_017367156.1 hypothetical protein Regulator
  NM232_RS17820 - 3329807..3330724 (-) 918 WP_255233760.1 sigmaE regulated sporulation protein -
  NM232_RS17825 - 3330808..3331389 (+) 582 WP_065460282.1 molybdenum cofactor guanylyltransferase -
  NM232_RS17830 - 3331419..3332435 (+) 1017 WP_065460285.1 ThiF family adenylyltransferase -
  NM232_RS17835 glp 3332445..3333719 (+) 1275 WP_058213808.1 gephyrin-like molybdotransferase Glp -
  NM232_RS17840 mobB 3333701..3334228 (+) 528 WP_035701053.1 molybdopterin-guanine dinucleotide biosynthesis protein B -
  NM232_RS17845 - 3334221..3334712 (+) 492 WP_035700602.1 molybdenum cofactor biosynthesis protein MoaE -

Sequence

Protein


Download         Length: 193 a.a.        Molecular weight: 21875.86 Da        Isoelectric Point: 9.7309

>NTDB_id=710018 NM232_RS17815 WP_017367156.1 3329163..3329744(+) (rok) [Bacillus altitudinis strain HM-7]
MFNEREALRLRLEQLNEAEVKVIREYQIERDAIYAKLRELDRQGTGLVTDTKKEVRTERKTDSLPVLAELAAQEMRSYQQ
PAQTQSNVTSSLGTGQLNGAPVGIPEGSTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNM
TTFMQSLIKMYPEVKKPYRGQYILEGDIQTEDE

Nucleotide


Download         Length: 582 bp        

>NTDB_id=710018 NM232_RS17815 WP_017367156.1 3329163..3329744(+) (rok) [Bacillus altitudinis strain HM-7]
TTGTTTAATGAGAGGGAAGCGTTACGTTTACGATTGGAACAATTAAACGAAGCAGAAGTAAAGGTCATCCGTGAATATCA
AATTGAACGAGATGCGATTTACGCAAAACTAAGAGAATTAGACCGTCAAGGTACAGGTCTCGTCACAGATACAAAAAAAG
AAGTGCGTACAGAGAGAAAAACGGATTCATTGCCTGTATTAGCTGAGCTGGCTGCACAAGAAATGAGAAGCTACCAGCAG
CCTGCGCAAACGCAGTCAAACGTTACTTCATCTTTAGGAACAGGTCAGCTAAATGGTGCACCTGTAGGTATTCCTGAAGG
ATCTACAAGACGCAGAAGAGGCACAGCTAGACCTGGATCAAAGGCAGCTAAGCTTCGTGAAGCTGCAATCAAAACATTAA
AGCGTCATAATGCGGCGATTAAAAGCTCTGAACTCCAAAAAGAGATTGAAAAAGAGAGCGGTCTTGAAATTCCAAATATG
ACAACGTTTATGCAAAGCTTAATTAAAATGTACCCAGAAGTGAAGAAACCTTATCGCGGACAGTATATTTTAGAAGGCGA
CATTCAAACAGAAGACGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

80

98.446

0.788