Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NM232_RS16110 Genome accession   NZ_CP101399
Coordinates   3006489..3007439 (+) Length   316 a.a.
NCBI ID   WP_017366964.1    Uniprot ID   A0A9X0FWU4
Organism   Bacillus altitudinis strain HM-7     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 3001489..3012439
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS16090 - 3002724..3003206 (+) 483 WP_146269903.1 hypothetical protein -
  NM232_RS16095 - 3003237..3004676 (-) 1440 WP_255233732.1 PLP-dependent aminotransferase family protein -
  NM232_RS16100 - 3004820..3005989 (+) 1170 WP_025207100.1 MFS transporter -
  NM232_RS16105 - 3006052..3006330 (+) 279 WP_017360231.1 barstar family protein -
  NM232_RS16110 ceuB 3006489..3007439 (+) 951 WP_017366964.1 ABC transporter permease Machinery gene
  NM232_RS16115 - 3007432..3008382 (+) 951 WP_019743340.1 iron chelate uptake ABC transporter family permease subunit -
  NM232_RS16120 - 3008373..3009131 (+) 759 WP_057079732.1 ABC transporter ATP-binding protein -
  NM232_RS16125 - 3009154..3010098 (+) 945 WP_058213981.1 siderophore ABC transporter substrate-binding protein -
  NM232_RS16130 - 3010238..3011194 (+) 957 WP_007499147.1 LCP family protein -
  NM232_RS16135 - 3011229..3011663 (-) 435 WP_035700181.1 hypothetical protein -
  NM232_RS16140 - 3011749..3012111 (-) 363 WP_008348633.1 hypothetical protein -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 34945.28 Da        Isoelectric Point: 9.7475

>NTDB_id=710005 NM232_RS16110 WP_017366964.1 3006489..3007439(+) (ceuB) [Bacillus altitudinis strain HM-7]
MKLYQLSLLFVCLACASLFVGVQDLSLLQLFHLSDEQMNTLFSSRIPRLMSIVLAGMSLSLCGFIMQSMTRNKFVSPTTA
GTMDWAKLGILTAMLVFTQASPLMKMAIAFLFTLAGNLLFLKILRHIKVNDTIYVPLVGLMFGGIVSSISTFIAYKYDLI
QNVSAWLQGDFSLIVQGRYELLYVSVPLLIIAYLYADRFTVAGMGESFAVNLGLTYKRVMAVGLVIVSMITSVTILTVGM
LPFLGLIIPNIVSIYRGDHLKKSLPHTALLGAIFVLICDVLGRVIIYPYEISVGLMVGIIGSAIFLYMLLRRKRYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=710005 NM232_RS16110 WP_017366964.1 3006489..3007439(+) (ceuB) [Bacillus altitudinis strain HM-7]
ATGAAGTTGTACCAATTAAGTTTGTTGTTTGTGTGTTTGGCATGTGCGTCGCTGTTTGTCGGAGTACAGGACCTGTCTCT
TTTACAGTTGTTTCATCTATCAGATGAACAAATGAACACCTTATTTTCAAGTCGCATCCCGCGGCTGATGAGTATTGTGC
TTGCTGGCATGAGCCTGAGCTTATGCGGTTTTATCATGCAAAGCATGACGAGAAATAAATTTGTCTCTCCAACGACTGCA
GGAACAATGGATTGGGCCAAGCTGGGTATTTTAACCGCTATGCTTGTTTTTACACAGGCAAGCCCGCTGATGAAAATGGC
GATTGCGTTTTTATTTACGTTAGCTGGCAATCTATTATTCTTAAAAATTCTACGCCATATTAAGGTGAACGATACGATCT
ACGTACCGTTAGTCGGCTTAATGTTTGGCGGAATTGTTAGTTCAATTTCCACGTTTATAGCCTATAAATATGATTTGATC
CAAAACGTATCCGCATGGCTGCAAGGGGATTTTTCTCTTATTGTTCAGGGGCGTTATGAACTGCTCTATGTAAGTGTTCC
TCTATTGATCATCGCGTATTTATATGCTGACCGCTTTACAGTGGCTGGTATGGGTGAGAGCTTTGCCGTCAATTTAGGTT
TAACGTATAAACGTGTCATGGCAGTTGGTTTGGTGATTGTTTCGATGATTACTTCTGTAACGATTTTGACTGTTGGCATG
CTACCTTTCCTCGGCTTAATCATTCCGAATATTGTATCGATCTACCGAGGGGATCACTTGAAAAAGAGCCTTCCGCATAC
GGCTTTATTAGGGGCCATTTTTGTGCTCATATGTGACGTGCTCGGACGAGTGATCATTTATCCATATGAAATATCTGTCG
GGCTTATGGTCGGCATCATTGGAAGTGCGATCTTCCTGTACATGTTATTAAGGAGGAAGCGCTATGCATAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(10-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

52

94.937

0.494