Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0A   Type   Regulator
Locus tag   NM232_RS02305 Genome accession   NZ_CP101399
Coordinates   387496..388299 (-) Length   267 a.a.
NCBI ID   WP_008342226.1    Uniprot ID   A0A5K1NAR3
Organism   Bacillus altitudinis strain HM-7     
Function   activation and repression of comK; repression of rok; repression of abrB (predicted from homology)   
Competence regulation

Genomic Context

Location: 382496..393299
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NM232_RS02290 - 384712..384948 (+) 237 WP_008342229.1 DUF2627 domain-containing protein -
  NM232_RS02295 - 384982..385719 (-) 738 WP_008342228.1 glycerophosphodiester phosphodiesterase -
  NM232_RS02300 - 385946..387046 (-) 1101 WP_007501159.1 Rap family tetratricopeptide repeat protein -
  NM232_RS02305 spo0A 387496..388299 (-) 804 WP_008342226.1 sporulation transcription factor Spo0A Regulator
  NM232_RS02310 spoIVB 388583..389860 (-) 1278 WP_065460685.1 SpoIVB peptidase -
  NM232_RS02315 recN 390059..391792 (-) 1734 WP_008342224.1 DNA repair protein RecN Machinery gene
  NM232_RS02320 argR 391827..392276 (-) 450 WP_007501163.1 transcriptional regulator ArgR -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29891.41 Da        Isoelectric Point: 6.3918

>NTDB_id=709964 NM232_RS02305 WP_008342226.1 387496..388299(-) (spo0A) [Bacillus altitudinis strain HM-7]
MEKIKVCVADDNRELVGLLTEYIEGQEDMEVLGVAYNGQECLTLFKDKEPDVLLLDIIMPHLDGLAVLERLRENNEMTKQ
PSVIMLTAFGQEDVTKKAVDLGASYFILKPFDMENLVGHIRQVSGNGTQVSHRSSSIQNSVLRSKPEPKRKNLDASITTI
IHEIGVPAHIKGYLYLREAISMVYNDIELLGSITKVLYPDIAKKFNTTASRVERAIRHAIEVAWSRGNIDSISSLFGYTV
SMSKAKPTNSEFIAMVADRLRLEHRAS

Nucleotide


Download         Length: 804 bp        

>NTDB_id=709964 NM232_RS02305 WP_008342226.1 387496..388299(-) (spo0A) [Bacillus altitudinis strain HM-7]
GTGGAGAAAATTAAAGTGTGTGTAGCTGATGATAATCGAGAACTTGTTGGCCTTTTGACAGAGTATATTGAGGGACAGGA
AGATATGGAAGTACTTGGCGTGGCGTATAATGGTCAGGAATGTCTGACATTATTTAAAGATAAAGAGCCCGACGTTCTCC
TCTTAGATATTATCATGCCTCATTTAGACGGTCTTGCTGTACTGGAACGCCTCCGTGAAAACAATGAAATGACCAAACAG
CCAAGTGTCATTATGCTGACGGCTTTCGGACAAGAAGACGTAACGAAAAAAGCGGTTGATTTGGGCGCATCCTATTTCAT
TTTGAAACCATTTGATATGGAAAACCTCGTAGGTCATATTCGTCAAGTCAGTGGAAACGGCACACAAGTCAGCCATCGAT
CTTCATCTATCCAAAACAGTGTCCTTCGCAGCAAACCTGAACCGAAACGTAAGAACTTAGATGCGAGCATTACGACAATT
ATTCATGAGATTGGCGTGCCAGCTCATATTAAAGGCTATTTATACTTAAGAGAAGCCATTTCGATGGTGTACAATGATAT
TGAACTACTCGGCAGTATTACAAAAGTATTGTACCCAGACATTGCAAAGAAATTTAACACGACAGCCAGCAGGGTAGAAC
GAGCGATTCGTCATGCCATTGAAGTGGCTTGGAGCAGAGGGAATATTGACTCCATTTCCTCACTCTTTGGTTACACAGTC
AGCATGTCAAAAGCCAAACCAACCAATTCAGAATTTATTGCGATGGTGGCTGATCGTCTGCGTTTAGAGCATAGAGCAAG
CTAA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(6-120)

Sporulation initiation factor Spo0A C terminal (Spo0A_C)

(157-260)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A5K1NAR3

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0A Bacillus subtilis subsp. subtilis str. 168

88.06

100

0.884