Detailed information    

insolico Bioinformatically predicted

Overview

Name   spo0J   Type   Regulator
Locus tag   PFZ59_RS02995 Genome accession   NZ_CP116393
Coordinates   567907..568671 (+) Length   254 a.a.
NCBI ID   WP_012775418.1    Uniprot ID   A0A0H3MY06
Organism   Streptococcus suis strain SS/UPM/MY/F001     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 562907..573671
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PFZ59_RS02960 (PFZ59_02960) - 563536..564792 (+) 1257 WP_277697767.1 ISL3 family transposase -
  PFZ59_RS02980 (PFZ59_02980) - 565289..565972 (-) 684 WP_208581756.1 YoaK family protein -
  PFZ59_RS02985 (PFZ59_02985) rlmH 565997..566476 (-) 480 WP_004194528.1 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH -
  PFZ59_RS02990 (PFZ59_02990) htrA 566650..567846 (+) 1197 WP_024384306.1 trypsin-like peptidase domain-containing protein Regulator
  PFZ59_RS02995 (PFZ59_02995) spo0J 567907..568671 (+) 765 WP_012775418.1 ParB/RepB/Spo0J family partition protein Regulator
  PFZ59_RS03000 (PFZ59_03000) dnaA 568874..570247 (+) 1374 WP_277697456.1 chromosomal replication initiator protein DnaA -
  PFZ59_RS03005 (PFZ59_03005) dnaN 570401..571537 (+) 1137 WP_004194538.1 DNA polymerase III subunit beta -
  PFZ59_RS03010 (PFZ59_03010) - 571629..572510 (+) 882 WP_208581750.1 diacylglycerol kinase family protein -
  PFZ59_RS03015 (PFZ59_03015) - 572520..572723 (+) 204 WP_024394586.1 DUF951 family protein -
  PFZ59_RS03020 (PFZ59_03020) - 572827..573186 (+) 360 WP_208581749.1 helix-turn-helix transcriptional regulator -

Sequence

Protein


Download         Length: 254 a.a.        Molecular weight: 28966.25 Da        Isoelectric Point: 9.4760

>NTDB_id=709843 PFZ59_RS02995 WP_012775418.1 567907..568671(+) (spo0J) [Streptococcus suis strain SS/UPM/MY/F001]
MEELRTLNISEIHPNPYQPRIHFDEKELLELAQSIKENGLIQPIIVRKSSIIGYELLAGERRLRASQLAGLTTIPAVVKE
LTDDDLLYQAIIENLQRSNLNPIEEAASYQKLISRGLTHDEVAQIMGKSRPYISNLLRLLNLSSQTKQAVEEGKISQGHA
RQLVSFSEEKQAEWVQLILSKDLSVRTLEKLIAANKKKHTKLKQRDQFLKEQEDSLSKTLGTATKIIKKKNGSGEIRISF
NDLDEFERIINNFK

Nucleotide


Download         Length: 765 bp        

>NTDB_id=709843 PFZ59_RS02995 WP_012775418.1 567907..568671(+) (spo0J) [Streptococcus suis strain SS/UPM/MY/F001]
ATGGAAGAATTACGTACACTAAATATTTCAGAAATCCATCCCAATCCCTATCAGCCAAGAATTCATTTTGATGAAAAGGA
GCTACTTGAGCTCGCTCAATCTATTAAGGAAAATGGCTTAATTCAACCGATTATTGTAAGAAAATCTTCTATTATCGGAT
ACGAATTATTAGCTGGAGAAAGAAGGTTGCGAGCCAGTCAATTAGCTGGACTGACTACAATACCAGCAGTGGTAAAAGAA
CTGACTGATGATGATTTACTCTATCAGGCTATCATAGAGAATCTGCAGCGTTCTAACTTAAATCCGATAGAAGAAGCAGC
CTCTTATCAAAAATTGATTAGTAGAGGGTTAACACATGATGAAGTTGCTCAAATCATGGGAAAATCAAGACCATATATCA
GTAATTTATTGCGCCTACTAAATCTATCATCTCAGACTAAACAAGCTGTAGAAGAAGGAAAAATTTCACAAGGGCACGCG
CGACAATTGGTGTCATTTTCAGAAGAAAAGCAAGCCGAATGGGTTCAACTCATTTTATCAAAGGATTTAAGTGTGCGTAC
GCTTGAAAAATTAATAGCTGCAAATAAGAAAAAACACACTAAGCTTAAACAACGCGACCAATTTTTAAAAGAACAGGAAG
ATTCACTCAGTAAAACTCTTGGAACAGCTACAAAAATTATCAAGAAGAAAAACGGGAGCGGAGAAATTCGAATTAGCTTT
AATGACCTCGATGAATTCGAAAGAATTATCAACAATTTTAAATAG

Domains

Predicted by InterProScan.

HTH domain found in ParB protein (HTH_ParB)

(146-193)

ParB/Sulfiredoxin domain (ParB_N)

(7-94)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MY06

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  spo0J Streptococcus mutans UA159

55.159

99.213

0.547