Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PIG43_RS05765 Genome accession   NZ_CP116387
Coordinates   1196870..1197811 (+) Length   313 a.a.
NCBI ID   WP_059212352.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain WM98     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1191870..1202811
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PIG43_RS05750 (PIG43_05740) basA 1192291..1194138 (+) 1848 WP_000910246.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -
  PIG43_RS05755 (PIG43_05745) basB 1194209..1196239 (-) 2031 WP_085920665.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  PIG43_RS05760 - 1196739..1196870 (+) 132 WP_001218004.1 hypothetical protein -
  PIG43_RS05765 (PIG43_05750) ceuB 1196870..1197811 (+) 942 WP_059212352.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  PIG43_RS05770 (PIG43_05755) bauC 1197811..1198758 (+) 948 WP_001223285.1 ferric acinetobactin ABC transporter permease subunit BauC -
  PIG43_RS05775 (PIG43_05760) bauE 1198755..1199525 (+) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  PIG43_RS05780 (PIG43_05765) bauB 1199532..1200500 (+) 969 WP_001104131.1 siderophore-binding periplasmic lipoprotein BauB -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34009.10 Da        Isoelectric Point: 8.6941

>NTDB_id=709609 PIG43_RS05765 WP_059212352.1 1196870..1197811(+) (ceuB) [Acinetobacter baumannii strain WM98]
MRFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGVILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYAAIAAIGLILVAITVSTTVITVGAI
PFVGLVVLNLVALKYGENLAKTLPIVALGGASLLLVCDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=709609 PIG43_RS05765 WP_059212352.1 1196870..1197811(+) (ceuB) [Acinetobacter baumannii strain WM98]
ATGCGATTTGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGTCGTATTCCTCGTTTAATTACCATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCGTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACTTCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGCTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGCTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGTCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTCGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGTTTGGGACTCA
GTTATGCAGCTATAGCCGCCATTGGTTTGATACTGGTTGCCATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCTCAATTTAGTCGCACTGAAATACGGAGAGAACTTAGCTAAAACCTTGCCCATTGTGGC
TTTAGGTGGGGCGTCTCTATTACTGGTTTGCGACATTCTTGGTCGCTCAATCATTTATCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTGGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419