Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H7680_RS06180 Genome accession   NZ_AP023394
Coordinates   1238182..1238661 (-) Length   159 a.a.
NCBI ID   WP_003058929.1    Uniprot ID   A0ABU0AAE0
Organism   Streptococcus dysgalactiae subsp. equisimilis strain 159     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 1233182..1243661
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7680_RS06160 (SDSE159_12010) - 1233481..1233822 (-) 342 WP_003054176.1 hypothetical protein -
  H7680_RS06165 (SDSE159_12020) - 1234000..1235652 (+) 1653 WP_014612356.1 NFACT family protein -
  H7680_RS06170 (SDSE159_12030) - 1235715..1236962 (-) 1248 WP_014612357.1 CDC27 family protein -
  H7680_RS06175 (SDSE159_12040) - 1236952..1238133 (-) 1182 WP_014612358.1 AI-2E family transporter -
  H7680_RS06180 (SDSE159_12050) mutX 1238182..1238661 (-) 480 WP_003058929.1 8-oxo-dGTP diphosphatase Machinery gene
  H7680_RS06185 (SDSE159_12060) - 1238857..1239048 (+) 192 WP_003058922.1 hypothetical protein -
  H7680_RS06190 (SDSE159_12070) - 1239136..1239861 (-) 726 WP_014612359.1 type II CAAX endopeptidase family protein -
  H7680_RS06195 (SDSE159_12080) rfbB 1240050..1241093 (-) 1044 WP_014612360.1 dTDP-glucose 4,6-dehydratase -
  H7680_RS06200 (SDSE159_12090) - 1241337..1241930 (-) 594 WP_002990099.1 dTDP-4-dehydrorhamnose 3,5-epimerase family protein -
  H7680_RS06205 (SDSE159_12100) rfbA 1241930..1242799 (-) 870 WP_003057684.1 glucose-1-phosphate thymidylyltransferase RfbA -

Sequence

Protein


Download         Length: 159 a.a.        Molecular weight: 18574.75 Da        Isoelectric Point: 4.2471

>NTDB_id=70950 H7680_RS06180 WP_003058929.1 1238182..1238661(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
MTQLATICYIDNGESLLLLHRNKKENDVHEGKWISVGGKLEAGETPDECARREILEETHLTVTEMAFKGIITFPEFTPGH
DWYTYVFKVTGFEGDLISDEESREGTLEWVPYNQVLEKPTWEGDYDIFKWILEDRPFFSAKFTYNETNQLIEKSVTFYD

Nucleotide


Download         Length: 480 bp        

>NTDB_id=70950 H7680_RS06180 WP_003058929.1 1238182..1238661(-) (mutX) [Streptococcus dysgalactiae subsp. equisimilis strain 159]
ATGACCCAATTGGCAACTATTTGTTATATTGATAATGGCGAGTCCTTGCTATTATTACACCGCAATAAAAAAGAAAATGA
TGTCCACGAAGGGAAGTGGATTTCAGTTGGAGGCAAGCTTGAAGCGGGAGAGACCCCAGATGAGTGTGCCCGTCGTGAGA
TTCTAGAGGAAACCCATTTGACCGTTACAGAGATGGCTTTTAAAGGAATCATTACTTTTCCAGAATTCACACCAGGTCAT
GATTGGTATACCTATGTTTTTAAAGTAACAGGATTTGAAGGAGACCTCATTTCCGATGAGGAGTCACGTGAAGGCACCCT
GGAATGGGTACCATATAATCAGGTATTGGAAAAACCGACATGGGAAGGGGATTATGACATTTTTAAATGGATTTTAGAAG
ACCGCCCCTTTTTTTCTGCCAAATTTACCTACAATGAAACTAACCAACTTATTGAGAAATCCGTCACCTTTTATGACTGA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(3-130)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

68.553

100

0.686

Multiple sequence alignment