Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NMT99_RS07700 Genome accession   NZ_CP101290
Coordinates   1469772..1470347 (+) Length   191 a.a.
NCBI ID   WP_003232378.1    Uniprot ID   -
Organism   Bacillus subtilis strain LjM2     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1464772..1475347
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMT99_RS07670 dapD 1464958..1465668 (+) 711 WP_003218680.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NMT99_RS07675 dapI 1465738..1466862 (+) 1125 WP_021479383.1 N-acetyldiaminopimelate deacetylase -
  NMT99_RS07680 ykuS 1466924..1467169 (+) 246 WP_003232382.1 YkuS family protein -
  NMT99_RS07685 mscT 1467206..1468009 (-) 804 WP_003244994.1 small-conductance mechanosensitive channel protein MscT -
  NMT99_RS07690 ahpA 1468246..1468788 (+) 543 WP_003245371.1 biofilm-specific peroxidase AhpA -
  NMT99_RS07695 ykuV 1468860..1469306 (+) 447 WP_015252187.1 thiol-disulfide oxidoreductase YkuV -
  NMT99_RS07700 rok 1469772..1470347 (+) 576 WP_003232378.1 transcriptional regulator Rok Regulator
  NMT99_RS07705 cse15 1470388..1471353 (-) 966 WP_029727015.1 spore protein Cse15 -
  NMT99_RS07710 mobA 1471490..1472089 (+) 600 WP_021479380.1 molybdenum cofactor guanylyltransferase -
  NMT99_RS07715 moeB 1472140..1473159 (+) 1020 WP_017696813.1 molybdopterin-synthase adenylyltransferase MoeB -
  NMT99_RS07720 glp 1473177..1474469 (+) 1293 WP_038427631.1 gephyrin-like molybdotransferase Glp -
  NMT99_RS07725 mobB 1474430..1474951 (+) 522 WP_029725925.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21839.85 Da        Isoelectric Point: 9.8633

>NTDB_id=709467 NMT99_RS07700 WP_003232378.1 1469772..1470347(+) (rok) [Bacillus subtilis strain LjM2]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEIKKDFRSEKKPDSLPVLAELAAQEIRSYQPQS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGEIESAESANE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=709467 NMT99_RS07700 WP_003232378.1 1469772..1470347(+) (rok) [Bacillus subtilis strain LjM2]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGGTTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGTGATAAAATATACGCAAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAATCAAAAAGGATTTCC
GTTCTGAAAAAAAACCTGACTCTCTGCCGGTTCTCGCTGAGCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCAATCA
CAGCAGCAGTCTGTCCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCAAAAGCAGCTAAGCTGCGTGAAGCTGCTATTAAAACATTAAAACGCCACAACGCGG
CGATTAAGAGCTCGGAGCTTCAAAAAGAGATTGAAAAAGAAAGCGGTCTTGAAATCCCTAATATGACAACGTTTATGCAA
AGCTTAATTAAAATGTACCCGGAAGTGAAAAAGCCATATCGCGGGCAGTACATTTTAGAGGGTGAAATCGAATCTGCAGA
ATCAGCAAATGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

100

100

1