Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   NMT99_RS04575 Genome accession   NZ_CP101290
Coordinates   901547..902341 (+) Length   264 a.a.
NCBI ID   WP_029726844.1    Uniprot ID   -
Organism   Bacillus subtilis strain LjM2     
Function   inhibit excessive RecA-mediated recombination (predicted from homology)   
Competence regulation

Genomic Context

Location: 896547..907341
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMT99_RS04545 sxzA 897386..898417 (+) 1032 WP_003233568.1 iron chelate uptake ABC transporter family permease subunit -
  NMT99_RS04550 yfhB 898532..899413 (+) 882 WP_003242763.1 PhzF family phenazine biosynthesis protein -
  NMT99_RS04555 yfhC 899501..900085 (+) 585 WP_003243940.1 nitroreductase -
  NMT99_RS04560 yfhD 900124..900315 (-) 192 WP_003233561.1 YfhD family protein -
  NMT99_RS04565 yfhE 900382..900492 (-) 111 WP_003223230.1 YfhE family protein -
  NMT99_RS04570 yfhF 900547..901458 (-) 912 WP_029726845.1 TIGR01777 family oxidoreductase -
  NMT99_RS04575 recX 901547..902341 (+) 795 WP_029726844.1 recombination regulator RecX Regulator
  NMT99_RS04580 yfhH 902343..902663 (+) 321 WP_029726843.1 YfhH family protein -
  NMT99_RS04585 yfhI 902800..903993 (+) 1194 WP_080477804.1 MFS transporter -
  NMT99_RS04590 sspK 904025..904177 (-) 153 WP_003223241.1 small, acid-soluble spore protein K -
  NMT99_RS04595 yfhJ 904302..904571 (+) 270 WP_003243789.1 YfhJ family protein -
  NMT99_RS04600 yfhK 904716..905234 (+) 519 WP_015715537.1 SH3 domain-containing protein -
  NMT99_RS04605 spdL 905319..905651 (+) 333 WP_024573182.1 SdpC immunity protein SpdL -
  NMT99_RS04610 ephM 905638..906498 (+) 861 WP_069703773.1 epoxide hydrolase EphM -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 31047.25 Da        Isoelectric Point: 6.6686

>NTDB_id=709449 NMT99_RS04575 WP_029726844.1 901547..902341(+) (recX) [Bacillus subtilis strain LjM2]
MPFITKISTQKKNTERFNIFLDDKYAFSVDADVLVKFELKKGKELDDLDIIEIQYGDEVKKGFNRALDFLSYRMRSTKEV
EDHLKKKETSPPVIAEVIHRLNDYKYLNDQEFAAAYVSTHKKTNGKGPDVLFRELRAKGIDDDTIKEALSSFSFEDQTRE
AVKHVEKLLKKDKKLSTKEFKQRAQLQLQRKGFSFDVISAAMDQIEYENDEDTEKEALRLHAEKAFRKYRYDGSYESAMK
VKQFLFRKGFSLDLIEQLLQEEEY

Nucleotide


Download         Length: 795 bp        

>NTDB_id=709449 NMT99_RS04575 WP_029726844.1 901547..902341(+) (recX) [Bacillus subtilis strain LjM2]
ATGCCGTTTATTACAAAAATATCAACGCAAAAAAAGAATACGGAACGCTTCAATATTTTTCTGGATGATAAATACGCCTT
CAGCGTGGACGCGGATGTGCTCGTGAAATTTGAGCTCAAGAAGGGAAAAGAACTCGATGATCTTGACATCATTGAAATTC
AATACGGCGATGAAGTGAAGAAAGGCTTCAACCGTGCGCTTGACTTTTTATCCTATCGAATGCGGTCGACGAAAGAGGTC
GAGGACCACTTAAAGAAAAAAGAAACCTCGCCCCCCGTCATTGCGGAAGTCATCCATAGGCTTAACGATTACAAGTACTT
AAACGACCAGGAATTTGCCGCAGCCTATGTCAGCACTCACAAAAAAACAAACGGAAAAGGCCCTGATGTTTTGTTCAGAG
AGCTAAGAGCGAAGGGAATTGATGACGATACAATTAAGGAGGCGCTAAGTTCCTTTTCCTTTGAAGATCAGACAAGAGAA
GCGGTCAAGCATGTTGAAAAGCTTCTCAAAAAAGATAAAAAGCTTTCGACGAAAGAATTCAAACAGCGCGCCCAGCTGCA
GCTTCAGCGCAAGGGCTTCTCATTTGATGTTATCAGCGCGGCGATGGATCAGATTGAATATGAAAATGATGAAGACACGG
AGAAAGAAGCGCTGCGCCTTCACGCGGAAAAAGCGTTTAGAAAATACCGCTATGACGGCTCATATGAAAGCGCCATGAAG
GTCAAACAATTTTTATTCCGCAAAGGATTCTCACTCGATTTAATCGAGCAATTACTGCAGGAAGAGGAGTACTGA

Domains

Predicted by InterproScan.

RecX family (RecX_HTH2)

(84-204)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Bacillus subtilis subsp. subtilis str. 168

99.621

100

0.996