Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NMT99_RS02005 Genome accession   NZ_CP101290
Coordinates   389106..389246 (+) Length   46 a.a.
NCBI ID   WP_010886404.1    Uniprot ID   A0AAX3RTW8
Organism   Bacillus subtilis strain LjM2     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 384106..394246
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NMT99_RS02000 srfAB 385973..389062 (+) 3090 Protein_350 surfactin non-ribosomal peptide synthetase SrfAB -
  NMT99_RS02005 comS 389106..389246 (+) 141 WP_010886404.1 competence protein ComS Regulator

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5244.05 Da        Isoelectric Point: 9.2422

>NTDB_id=709444 NMT99_RS02005 WP_010886404.1 389106..389246(+) (comS) [Bacillus subtilis strain LjM2]
MNRSGKHLISSIILYPRPSGECISSISLDKQTQATTSPLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=709444 NMT99_RS02005 WP_010886404.1 389106..389246(+) (comS) [Bacillus subtilis strain LjM2]
TTGAACCGATCAGGCAAGCATCTTATCAGCAGCATTATCCTGTATCCCCGGCCCAGCGGAGAATGTATATCCTCAATCAG
CTTGGACAAGCAAACACAAGCTACAACGTCCCCGCTGTACTTCTGCTGGAGGGAGAAGTAG

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

100

100

1