Detailed information NTG0709380

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PH192_RS14190
• Genome accession: NZ_CP116241
• Coordinates: 2933170..2934195 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain 7.1994/NIST0056
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2928170..2939195

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PH192_RS14170 (PH192_14165)	metJ	2929231..2929548 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PH192_RS14175 (PH192_14170)	yiiX	2929732..2930340 (+)	609	WP_000797344.1	YiiX family permuted papain-like enzyme	-
PH192_RS14180 (PH192_14175)	rpmE	2930401..2930613 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PH192_RS14185 (PH192_14180)	priA	2930816..2933014 (+)	2199	WP_001315935.1	primosomal protein N'	Machinery gene
PH192_RS14190 (PH192_14185)	cytR	2933170..2934195 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PH192_RS14195 (PH192_14190)	ftsN	2934287..2935246 (+)	960	WP_000068834.1	cell division protein FtsN	-
PH192_RS14200 (PH192_14195)	hslV	2935339..2935869 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PH192_RS14205 (PH192_14200)	hslU	2935879..2937210 (+)	1332	WP_001293343.1	HslU--HslV peptidase ATPase subunit	-
PH192_RS14210 (PH192_14205)	menA	2937277..2938203 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PH192_RS14215 (PH192_14210)	rraA	2938296..2938781 (+)	486	WP_097436930.1	ribonuclease E activity regulator RraA	-
PH192_RS14220 (PH192_14215)	zapB	2938866..2939111 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=709380 PH192_RS14190 WP_000644904.1 2933170..2934195(+) (cytR) [Escherichia coli strain 7.1994/NIST0056]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=709380 PH192_RS14190 WP_000644904.1 2933170..2934195(+) (cytR) [Escherichia coli strain 7.1994/NIST0056]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAACCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGCTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628