Detailed information NTG0709194

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIB97_RS22110
• Genome accession: NZ_CP116197
• Coordinates: 4642110..4643135 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DETEC-C31
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4637110..4648135

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIB97_RS22090 (PIB97_22080)	-	4637519..4638655 (-)	1137	Protein_4319	ISAs1-like element ISEc1 family transposase	-
PIB97_RS22095 (PIB97_22085)	-	4638789..4639181 (-)	393	Protein_4320	DUF6531 domain-containing protein	-
PIB97_RS22100 (PIB97_22090)	rpmE	4639341..4639553 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIB97_RS22105 (PIB97_22095)	priA	4639756..4641954 (+)	2199	WP_174402689.1	primosomal protein N'	Machinery gene
PIB97_RS22110 (PIB97_22100)	cytR	4642110..4643135 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PIB97_RS22115 (PIB97_22105)	ftsN	4643227..4644186 (+)	960	WP_000068837.1	cell division protein FtsN	-
PIB97_RS22120 (PIB97_22110)	hslV	4644279..4644809 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PIB97_RS22125 (PIB97_22115)	hslU	4644819..4646150 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PIB97_RS22130 (PIB97_22120)	menA	4646217..4647143 (+)	927	WP_001308187.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIB97_RS22135 (PIB97_22125)	rraA	4647236..4647721 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=709194 PIB97_RS22110 WP_000644904.1 4642110..4643135(+) (cytR) [Escherichia coli strain DETEC-C31]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=709194 PIB97_RS22110 WP_000644904.1 4642110..4643135(+) (cytR) [Escherichia coli strain DETEC-C31]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATAGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGTTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTAATGGCACTCGGCGCACTTTCGCAGGCAAAACGCCA
GGGGCTGAAAGTACCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCACGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628