Detailed information NTG0709091

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PIB63_RS18950
• Genome accession: NZ_CP116194
• Coordinates: 3880734..3881939 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain DETEC-E1005
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3875734..3886939

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIB63_RS18935 (PIB63_18935)	-	3876249..3877925 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
PIB63_RS18940 (PIB63_18940)	kdsB	3877935..3878675 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PIB63_RS18945 (PIB63_18945)	-	3878672..3880699 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
PIB63_RS18950 (PIB63_18950)	kpsS	3880734..3881939 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
PIB63_RS18955 (PIB63_18955)	-	3882089..3883318 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
PIB63_RS18960 (PIB63_18960)	-	3883308..3884456 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
PIB63_RS18965 (PIB63_18965)	neuC	3884449..3885624 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PIB63_RS18970 (PIB63_18970)	-	3885621..3886877 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=709091 PIB63_RS18950 WP_001161835.1 3880734..3881939(+) (kpsS) [Escherichia coli strain DETEC-E1005]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=709091 PIB63_RS18950 WP_001161835.1 3880734..3881939(+) (kpsS) [Escherichia coli strain DETEC-E1005]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387