Detailed information NTG0709051

Bioinformatically predicted

Overview

• Name: comFA
• Type: Machinery gene
• Locus tag: NLJ82_RS25545
• Genome accession: NZ_CP101135
• Coordinates: 4906836..4908185 (-)
• Length: 449 a.a.
• NCBI ID: WP_000900493.1
• Uniprot ID: -
• Organism: Bacillus paranthracis strain Bt C4
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 4901836..4913185

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLJ82_RS25525 (NLJ82_25525)	secA	4902161..4904668 (-)	2508	WP_000579382.1	preprotein translocase subunit SecA	-
NLJ82_RS25530 (NLJ82_25530)	raiA	4904945..4905487 (-)	543	WP_000671191.1	ribosome-associated translation inhibitor RaiA	-
NLJ82_RS25535 (NLJ82_25535)	cspC	4905808..4906005 (-)	198	WP_001162041.1	cold shock protein CspC	-
NLJ82_RS25540 (NLJ82_25540)	-	4906132..4906836 (-)	705	WP_002028884.1	ComF family protein	-
NLJ82_RS25545 (NLJ82_25545)	comFA	4906836..4908185 (-)	1350	WP_000900493.1	ATP-dependent helicase ComFA	Machinery gene
NLJ82_RS25550 (NLJ82_25550)	-	4908312..4909757 (-)	1446	WP_000499502.1	NlpC/P60 family protein	-
NLJ82_RS25555 (NLJ82_25555)	-	4909905..4910219 (-)	315	WP_000400857.1	helix-turn-helix domain-containing protein	-
NLJ82_RS25560 (NLJ82_25560)	-	4910393..4911235 (-)	843	WP_000844764.1	DegV family protein	-
NLJ82_RS25565 (NLJ82_25565)	-	4911475..4912110 (+)	636	WP_000926695.1	YigZ family protein	-

Sequence

Protein

• Length: 449 a.a.
• Molecular weight: 51011.49 Da
• Isoelectric Point: 9.7406

>NTDB_id=709051 NLJ82_RS25545 WP_000900493.1 4906836..4908185(-) (comFA) [Bacillus paranthracis strain Bt C4]
MLGGKQLLLEELSSDLRRELSDLKKRGEVVCVQGITKNTSKYICQRCGNIEQRLFASFLCKRCGKACAYCRKCITMGRVS
ECAVLVRGIHERNGDRELNPLQWNGALSIGQELAAQGVIEAIKQKESFFIWAVCGAGKTEMLFYGIEEALQKGERVCIAT
PRTDVVLELAPRLQEVFPSITVAALYGGSVDHKKDAALVVATTHQLLRYYRAFHVMIVDEIDAFPYHADQMLQYAVRQAM
KEKAARIYLTATPDEKWKRNFRKGKQKGVIVSGRYHRHPLPVPLFSWCGNWKKSLHHKKIPRVLLQWLKMNLNKKYPIFL
FVPHVRYIEEISQLLKGLDNRIDGVHAEDSMRKEKVASFRKGDIPLLVTTTILERGVTVKNLQVAVLGAEEEIFSESALV
QIAGRAGRSFEEPYGEVMYFHYGKTEAMVRAKKHIQSMNKNAKEQGLID

Nucleotide

• Length: 1350 bp

>NTDB_id=709051 NLJ82_RS25545 WP_000900493.1 4906836..4908185(-) (comFA) [Bacillus paranthracis strain Bt C4]
ATGCTTGGTGGAAAACAGTTGCTATTAGAAGAACTCTCTTCAGATTTACGGAGAGAATTAAGTGATTTGAAAAAGAGGGG
AGAGGTTGTATGTGTACAAGGTATAACGAAGAATACTTCTAAATATATATGTCAGCGCTGCGGAAATATAGAGCAGCGGC
TATTTGCATCATTTTTATGTAAAAGGTGCGGTAAAGCATGCGCGTATTGCCGGAAGTGTATCACGATGGGGAGAGTTAGT
GAATGTGCTGTACTTGTTCGCGGAATTCATGAAAGAAACGGAGACAGGGAGCTAAATCCATTACAGTGGAATGGGGCTTT
ATCGATTGGTCAGGAGTTGGCGGCGCAAGGAGTTATAGAAGCGATTAAGCAGAAAGAATCTTTTTTTATTTGGGCTGTGT
GCGGGGCTGGAAAAACAGAAATGTTATTTTACGGTATAGAAGAGGCGCTCCAAAAAGGAGAAAGAGTGTGTATCGCAACG
CCAAGGACGGACGTTGTACTGGAATTAGCGCCGAGATTACAAGAAGTGTTTCCAAGTATAACTGTAGCTGCTTTATACGG
AGGGAGTGTAGATCATAAAAAAGATGCAGCGTTAGTCGTTGCAACGACTCACCAACTGTTACGTTACTATAGAGCGTTTC
ATGTGATGATTGTAGATGAGATTGATGCCTTCCCGTATCATGCGGATCAAATGTTACAGTATGCAGTTAGGCAAGCAATG
AAAGAGAAAGCAGCGCGTATTTATTTAACTGCAACCCCTGATGAAAAATGGAAGCGTAATTTCAGAAAGGGGAAACAAAA
AGGTGTTATTGTGTCAGGACGATACCATCGTCACCCGTTACCAGTTCCTCTATTTAGTTGGTGCGGAAATTGGAAGAAAA
GCCTCCATCATAAAAAAATTCCTCGCGTGTTACTACAATGGTTAAAAATGAACTTAAACAAAAAGTATCCTATTTTTTTA
TTTGTTCCTCATGTGCGATATATAGAAGAAATAAGTCAGTTGTTGAAAGGGTTGGATAATAGAATCGATGGCGTGCATGC
AGAAGATTCGATGAGAAAAGAAAAAGTAGCATCTTTCAGAAAGGGAGACATTCCGTTATTAGTTACAACGACAATTTTAG
AAAGAGGAGTAACTGTGAAGAACTTACAAGTGGCTGTGTTAGGAGCTGAAGAAGAAATTTTTTCAGAGAGTGCGCTCGTA
CAAATTGCAGGCCGAGCGGGGCGTAGTTTTGAAGAGCCATATGGTGAGGTTATGTATTTTCATTACGGTAAGACAGAGGC
AATGGTACGCGCGAAAAAACATATTCAAAGTATGAACAAAAATGCGAAAGAACAAGGATTGATCGATTAA

Domains

Predicted by InterproScan.

• Helicase conserved C-terminal domain (Helicase_C) (311-408)

• Type III restriction enzyme, res subunit (ResIII) (110-254)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comFA	Bacillus subtilis subsp. subtilis str. 168	52.632	93.096	0.49
comFA	Latilactobacillus sakei subsp. sakei 23K	40	90.2	0.361