Detailed information NTG0709004

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PIC72_RS18945
• Genome accession: NZ_CP116191
• Coordinates: 3879417..3880622 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain DETEC-E1070
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3874417..3885622

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC72_RS18930 (PIC72_18930)	-	3874932..3876608 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
PIC72_RS18935 (PIC72_18935)	kdsB	3876618..3877358 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PIC72_RS18940 (PIC72_18940)	-	3877355..3879382 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
PIC72_RS18945 (PIC72_18945)	kpsS	3879417..3880622 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
PIC72_RS18950 (PIC72_18950)	-	3880772..3882001 (-)	1230	WP_000575410.1	alpha-2,8-polysialyltransferase family protein	-
PIC72_RS18955 (PIC72_18955)	-	3881991..3883139 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
PIC72_RS18960 (PIC72_18960)	neuC	3883132..3884307 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PIC72_RS18965 (PIC72_18965)	-	3884304..3885560 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=709004 PIC72_RS18945 WP_001161835.1 3879417..3880622(+) (kpsS) [Escherichia coli strain DETEC-E1070]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=709004 PIC72_RS18945 WP_001161835.1 3879417..3880622(+) (kpsS) [Escherichia coli strain DETEC-E1070]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387