Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   NK667_RS29540 Genome accession   NZ_CP101125
Coordinates   6684776..6685180 (+) Length   134 a.a.
NCBI ID   WP_008152601.1    Uniprot ID   -
Organism   Pseudomonas nunensis strain In5     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 6679776..6690180
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NK667_RS29515 (NK667_29515) pyrR 6680795..6681301 (-) 507 WP_054044401.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  NK667_RS29520 (NK667_29520) ruvX 6681383..6681820 (-) 438 WP_005792259.1 Holliday junction resolvase RuvX -
  NK667_RS29525 (NK667_29525) - 6681820..6682392 (-) 573 WP_054044400.1 YqgE/AlgH family protein -
  NK667_RS29530 (NK667_29530) - 6682574..6683473 (-) 900 WP_054616924.1 energy transducer TonB -
  NK667_RS29535 (NK667_29535) gshB 6683579..6684550 (-) 972 WP_054616923.1 glutathione synthase -
  NK667_RS29540 (NK667_29540) pilG 6684776..6685180 (+) 405 WP_008152601.1 twitching motility response regulator PilG Regulator
  NK667_RS29545 (NK667_29545) pilH 6685238..6685603 (+) 366 WP_007897961.1 twitching motility response regulator PilH -
  NK667_RS29550 (NK667_29550) - 6685614..6686168 (+) 555 WP_054044395.1 chemotaxis protein CheW -
  NK667_RS29560 (NK667_29560) - 6686326..6688383 (+) 2058 WP_054044393.1 methyl-accepting chemotaxis protein -

Sequence

Protein


Download         Length: 134 a.a.        Molecular weight: 14589.99 Da        Isoelectric Point: 7.2441

>NTDB_id=708913 NK667_RS29540 WP_008152601.1 6684776..6685180(+) (pilG) [Pseudomonas nunensis strain In5]
MEQHSSALKVMVIDDSKTIRRTAETLLKNVGCEVITAIDGFDALAKIADNHPGIIFVDIMMPRLDGYQTCALIKNNSAFK
STPVIMLSSKDGLFDKAKGRIVGSDQFLTKPFSKEELLNAIQAHVPGFAAVLPQ

Nucleotide


Download         Length: 405 bp        

>NTDB_id=708913 NK667_RS29540 WP_008152601.1 6684776..6685180(+) (pilG) [Pseudomonas nunensis strain In5]
ATGGAACAGCATTCCAGCGCCTTGAAGGTCATGGTGATCGATGATTCGAAGACGATCCGCCGCACCGCCGAAACGCTGCT
GAAAAACGTAGGCTGTGAAGTCATCACGGCCATCGACGGTTTCGATGCGCTGGCCAAGATTGCCGACAATCATCCGGGCA
TTATCTTTGTCGACATCATGATGCCGCGTCTGGATGGTTATCAGACCTGCGCTTTAATCAAGAACAACAGTGCGTTCAAG
TCCACGCCAGTGATTATGCTGTCGTCCAAGGACGGGCTGTTCGACAAGGCCAAGGGGCGCATCGTCGGCTCCGACCAGTT
TTTGACCAAGCCTTTCAGCAAGGAAGAACTGCTGAACGCGATTCAGGCCCATGTTCCGGGCTTCGCCGCCGTTTTGCCGC
AGTAG

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-122)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

76

93.284

0.709