Detailed information NTG0708452

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIC71_RS21665
• Genome accession: NZ_CP116152
• Coordinates: 4385953..4386978 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DETEC-P61
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4380953..4391978

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC71_RS21645 (PIC71_21645)	metJ	4382014..4382331 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PIC71_RS21650 (PIC71_21650)	yiiX	4382515..4383123 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PIC71_RS21655 (PIC71_21655)	rpmE	4383184..4383396 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIC71_RS21660 (PIC71_21660)	priA	4383599..4385797 (+)	2199	WP_001300388.1	primosomal protein N'	Machinery gene
PIC71_RS21665 (PIC71_21665)	cytR	4385953..4386978 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PIC71_RS21670 (PIC71_21670)	ftsN	4387070..4388029 (+)	960	WP_000068828.1	cell division protein FtsN	-
PIC71_RS21675 (PIC71_21675)	hslV	4388122..4388652 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PIC71_RS21680 (PIC71_21680)	hslU	4388662..4389993 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PIC71_RS21685 (PIC71_21685)	menA	4390060..4390986 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIC71_RS21690 (PIC71_21690)	rraA	4391079..4391564 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PIC71_RS21695 (PIC71_21695)	zapB	4391649..4391894 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=708452 PIC71_RS21665 WP_000644904.1 4385953..4386978(+) (cytR) [Escherichia coli strain DETEC-P61]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=708452 PIC71_RS21665 WP_000644904.1 4385953..4386978(+) (cytR) [Escherichia coli strain DETEC-P61]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACACGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628