Detailed information NTG0708107

Bioinformatically predicted

Overview

• Name: kpsS
• Type: Regulator
• Locus tag: PIC92_RS19375
• Genome accession: NZ_CP116115
• Coordinates: 3947006..3948211 (+)
• Length: 401 a.a.
• NCBI ID: WP_001161835.1
• Uniprot ID: -
• Organism: Escherichia coli strain DETEC-P793
• Function: repress natural transformation (predicted from homology) Competence regulation

Genomic Context

Location: 3942006..3953211

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC92_RS19360 (PIC92_19360)	-	3942521..3944197 (+)	1677	WP_001298258.1	polysaccharide biosynthesis/export family protein	-
PIC92_RS19365 (PIC92_19365)	kdsB	3944207..3944947 (+)	741	WP_000030745.1	3-deoxy-manno-octulosonate cytidylyltransferase	-
PIC92_RS19370 (PIC92_19370)	-	3944944..3946971 (+)	2028	WP_000579517.1	capsular polysaccharide biosynthesis protein	-
PIC92_RS19375 (PIC92_19375)	kpsS	3947006..3948211 (+)	1206	WP_001161835.1	capsule biosynthesis protein	Regulator
PIC92_RS19380 (PIC92_19380)	-	3948361..3949590 (-)	1230	WP_271293011.1	alpha-2,8-polysialyltransferase family protein	-
PIC92_RS19385 (PIC92_19385)	-	3949580..3950728 (-)	1149	WP_024188362.1	DUF6716 putative glycosyltransferase	-
PIC92_RS19390 (PIC92_19390)	neuC	3950721..3951896 (-)	1176	WP_000723250.1	UDP-N-acetylglucosamine 2-epimerase	-
PIC92_RS19395 (PIC92_19395)	-	3951893..3953149 (-)	1257	WP_001259305.1	cytidylyltransferase domain-containing protein	-

Sequence

Protein

• Length: 401 a.a.
• Molecular weight: 47858.21 Da
• Isoelectric Point: 10.0398

>NTDB_id=708107 PIC92_RS19375 WP_001161835.1 3947006..3948211(+) (kpsS) [Escherichia coli strain DETEC-P793]
MQGNALTVLLSGKKYLLLQGPMGPFFNDVAEWLESLGRNAVNVVFNGGDRFYCRHRQYLAYYQTPKEFPGWLRDLHRQYD
FDTILCFGDCRPLHKEAKRWAKSKGIRFLAFEEGYLRPQFITVEEGGVNAYSSLPRDPDFYRKLPDMPAPHVENLKPSTM
KRIGHAMWYYLMGWHYRHEFPRYRHHKSFSPWYEARCWVRAYWRKQLYKVTQRKVLPRLMNELDQRYYLAVLQVYNDSQI
RNHSNYNDVRDYINEVMYSFSRKAPKESYLVIKHHPMDRGHRLYRPLIKRLSKEYGLGERVIYVHDLPMPELLRHAKAVV
TINSTAGISALIHNKPLKVMGNALYDIKGLTYQGHLHQFWQADFKPDMKLFKKFRGYLLMKTQVNWVYYGGNTTNCQHNI
Y

Nucleotide

• Length: 1206 bp

>NTDB_id=708107 PIC92_RS19375 WP_001161835.1 3947006..3948211(+) (kpsS) [Escherichia coli strain DETEC-P793]
ATGCAAGGTAATGCACTAACCGTTTTATTATCCGGTAAAAAATATCTGCTATTGCAGGGGCCGATGGGACCTTTTTTCAA
TGACGTCGCCGAATGGTTAGAGTCATTAGGACGTAACGCTGTGAATGTTGTATTCAACGGTGGGGATCGTTTTTACTGCC
GCCATCGACAATACCTGGCTTACTACCAAACGCCGAAAGAGTTCCCCGGATGGTTACGGGATCTCCACCGGCAATATGAC
TTTGATACCATCCTCTGCTTTGGTGACTGCCGCCCATTGCACAAAGAAGCAAAACGTTGGGCAAAGTCGAAAGGGATCCG
CTTTCTGGCATTTGAAGAAGGATATTTACGTCCGCAGTTTATTACTGTTGAAGAAGGCGGAGTGAACGCATATTCATCGC
TACCGCGCGATCCGGATTTTTATCGTAAGTTACCAGATATGCCTGCGCCGCACGTTGAGAACTTAAAACCTTCAACGATG
AAACGTATAGGTCATGCGATGTGGTATTACCTGATGGGTTGGCATTACCGTCATGAGTTCCCTCGCTACCGCCACCACAA
ATCGTTTTCCCCCTGGTATGAGGCTCGTTGCTGGGTTCGTGCATACTGGCGCAAGCAACTTTACAAGGTAACACAGCGTA
AGGTATTGCCGAGGTTAATGAACGAGCTGGACCAGCGTTATTATCTTGCCGTTTTGCAGGTGTATAACGATAGCCAGATT
CGTAACCACAGCAATTATAACGATGTGCGTGACTATATTAATGAAGTCATGTACTCATTTTCACGTAAAGCACCGAAAGA
AAGTTATTTGGTGATCAAGCACCATCCAATGGATCGTGGTCACAGACTCTATCGACCATTAATTAAGCGGCTAAGTAAGG
AATATGGCTTAGGTGAGCGCGTCATTTATGTGCACGATCTCCCGATGCCGGAACTATTACGCCACGCAAAAGCGGTGGTG
ACGATTAACAGTACGGCGGGGATCTCTGCACTGATTCATAACAAACCACTCAAAGTGATGGGCAATGCCCTGTACGACAT
CAAGGGCTTGACGTATCAAGGGCATTTGCACCAGTTCTGGCAGGCCGATTTTAAACCGGATATGAAACTGTTTAAGAAGT
TTCGGGGGTATTTATTGATGAAGACGCAGGTTAATTGGGTTTATTATGGGGGGAACACAACAAACTGCCAACATAATATA
TATTAA

Domains

Predicted by InterProScan.

• Capsule polysaccharide biosynthesis protein (Capsule_synth) (83-389)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
kpsS	Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819	39.846	97.007	0.387