Detailed information NTG0708040

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIC84_RS21745
• Genome accession: NZ_CP116110
• Coordinates: 4437384..4438409 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DETEC-P80
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4432384..4443409

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC84_RS21725 (PIC84_21725)	metJ	4433445..4433762 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PIC84_RS21730 (PIC84_21730)	yiiX	4433946..4434554 (+)	609	WP_000797353.1	YiiX family permuted papain-like enzyme	-
PIC84_RS21735 (PIC84_21735)	rpmE	4434615..4434827 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIC84_RS21740 (PIC84_21740)	priA	4435030..4437228 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PIC84_RS21745 (PIC84_21745)	cytR	4437384..4438409 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PIC84_RS21750 (PIC84_21750)	ftsN	4438501..4439460 (+)	960	WP_000068828.1	cell division protein FtsN	-
PIC84_RS21755 (PIC84_21755)	hslV	4439553..4440083 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PIC84_RS21760 (PIC84_21760)	hslU	4440093..4441424 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PIC84_RS21765 (PIC84_21765)	menA	4441491..4442417 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIC84_RS21770 (PIC84_21770)	rraA	4442510..4442995 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PIC84_RS21775 (PIC84_21775)	zapB	4443080..4443325 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=708040 PIC84_RS21745 WP_000644904.1 4437384..4438409(+) (cytR) [Escherichia coli strain DETEC-P80]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=708040 PIC84_RS21745 WP_000644904.1 4437384..4438409(+) (cytR) [Escherichia coli strain DETEC-P80]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628