Detailed information NTG0707759

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIC52_RS13320
• Genome accession: NZ_CP116100
• Coordinates: 2758588..2759613 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644908.1
• Uniprot ID: -
• Organism: Escherichia coli strain DETEC-P881
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 2753588..2764613

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC52_RS13300 (PIC52_13300)	metJ	2754773..2755090 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PIC52_RS13305 (PIC52_13305)	yiiX	2755150..2755758 (+)	609	WP_001606571.1	YiiX family permuted papain-like enzyme	-
PIC52_RS13310 (PIC52_13310)	rpmE	2755819..2756031 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIC52_RS13315 (PIC52_13315)	priA	2756234..2758432 (+)	2199	WP_001334265.1	primosomal protein N'	Machinery gene
PIC52_RS13320 (PIC52_13320)	cytR	2758588..2759613 (+)	1026	WP_000644908.1	DNA-binding transcriptional regulator CytR	Regulator
PIC52_RS13325 (PIC52_13325)	ftsN	2759705..2760664 (+)	960	WP_000068845.1	cell division protein FtsN	-
PIC52_RS13330 (PIC52_13330)	hslV	2760757..2761287 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PIC52_RS13335 (PIC52_13335)	hslU	2761297..2762628 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PIC52_RS13340 (PIC52_13340)	menA	2762695..2763621 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIC52_RS13345 (PIC52_13345)	rraA	2763714..2764199 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PIC52_RS13350 (PIC52_13350)	zapB	2764284..2764529 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37847.80 Da
• Isoelectric Point: 6.3842

>NTDB_id=707759 PIC52_RS13320 WP_000644908.1 2758588..2759613(+) (cytR) [Escherichia coli strain DETEC-P881]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSRAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=707759 PIC52_RS13320 WP_000644908.1 2758588..2759613(+) (cytR) [Escherichia coli strain DETEC-P881]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACTGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTAATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAGAGCAATGCAACAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGTCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625