Detailed information NTG0707385

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIC30_RS24570
• Genome accession: NZ_CP116071
• Coordinates: 4970794..4971819 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain DETEC-S589
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4965794..4976819

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIC30_RS24550 (PIC30_24550)	metJ	4966979..4967296 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PIC30_RS24555 (PIC30_24555)	yiiX	4967356..4967964 (+)	609	WP_000702319.1	YiiX family permuted papain-like enzyme	-
PIC30_RS24560 (PIC30_24560)	rpmE	4968025..4968237 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIC30_RS24565 (PIC30_24565)	priA	4968440..4970638 (+)	2199	WP_001350873.1	primosomal protein N'	Machinery gene
PIC30_RS24570 (PIC30_24570)	cytR	4970794..4971819 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PIC30_RS24575 (PIC30_24575)	ftsN	4971911..4972870 (+)	960	WP_000068834.1	cell division protein FtsN	-
PIC30_RS24580 (PIC30_24580)	hslV	4972963..4973493 (+)	531	WP_000208235.1	ATP-dependent protease subunit HslV	-
PIC30_RS24585 (PIC30_24585)	hslU	4973503..4974834 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PIC30_RS24590 (PIC30_24590)	menA	4974901..4975827 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIC30_RS24595 (PIC30_24595)	rraA	4975920..4976405 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PIC30_RS24600 (PIC30_24600)	zapB	4976490..4976735 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=707385 PIC30_RS24570 WP_000644904.1 4970794..4971819(+) (cytR) [Escherichia coli strain DETEC-S589]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=707385 PIC30_RS24570 WP_000644904.1 4970794..4971819(+) (cytR) [Escherichia coli strain DETEC-S589]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACTATTCTGGTGATTGTCCCGGATATCTGCGACCCT
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGCTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTACCTACAGTTCATATAGACAATCTGACCGCCGCATTTGATGCAGTAAATTATCTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCTGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGTTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628