Detailed information NTG0707055

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PGH49_RS23465
• Genome accession: NZ_CP116035
• Coordinates: 4762834..4763859 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644911.1
• Uniprot ID: -
• Organism: Escherichia coli strain FAH
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4757834..4768859

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PGH49_RS23445 (PGH49_23445)	metJ	4759019..4759336 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PGH49_RS23450 (PGH49_23450)	yiiX	4759396..4760004 (+)	609	WP_000702298.1	YiiX family permuted papain-like enzyme	-
PGH49_RS23455 (PGH49_23455)	rpmE	4760065..4760277 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PGH49_RS23460 (PGH49_23460)	priA	4760480..4762678 (+)	2199	WP_001540348.1	primosomal protein N'	Machinery gene
PGH49_RS23465 (PGH49_23465)	cytR	4762834..4763859 (+)	1026	WP_000644911.1	DNA-binding transcriptional regulator CytR	Regulator
PGH49_RS23470 (PGH49_23470)	ftsN	4763951..4764910 (+)	960	WP_000068847.1	cell division protein FtsN	-
PGH49_RS23475 (PGH49_23475)	hslV	4765003..4765533 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PGH49_RS23480 (PGH49_23480)	hslU	4765543..4766874 (+)	1332	WP_001293344.1	HslU--HslV peptidase ATPase subunit	-
PGH49_RS23485 (PGH49_23485)	menA	4766941..4767867 (+)	927	WP_001305044.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PGH49_RS23490 (PGH49_23490)	rraA	4767960..4768445 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PGH49_RS23495 (PGH49_23495)	zapB	4768530..4768775 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37805.71 Da
• Isoelectric Point: 6.1617

>NTDB_id=707055 PGH49_RS23465 WP_000644911.1 4762834..4763859(+) (cytR) [Escherichia coli strain FAH]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHNRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=707055 PGH49_RS23465 WP_000644911.1 4762834..4763859(+) (cytR) [Escherichia coli strain FAH]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACTCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCACAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGTACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAACTGGAG
CTGCCTACCGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAATCGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTACGTCCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCTGGAAGCAAAGCAATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	63.881	98.24	0.628
cytR	Vibrio cholerae C6706	65.138	95.894	0.625