Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   PF977_RS05640 Genome accession   NZ_CP116012
Coordinates   1096112..1096807 (+) Length   231 a.a.
NCBI ID   WP_015714560.1    Uniprot ID   -
Organism   Bacillus subtilis strain SRCM124333     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 1091112..1101807
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS05615 (PF977_05615) ytrB 1091140..1092018 (+) 879 WP_003229123.1 ABC transporter ATP-binding protein YtrB -
  PF977_RS05620 (PF977_05620) ytrC 1092012..1092998 (+) 987 WP_015714563.1 ABC transporter permease YtrC -
  PF977_RS05625 (PF977_05625) ytrD 1093028..1094005 (+) 978 WP_015714562.1 ABC transporter permease YtrD -
  PF977_RS05630 (PF977_05630) ytrE 1094020..1094715 (+) 696 WP_014477726.1 ABC transporter ATP-binding protein YtrE -
  PF977_RS05635 (PF977_05635) ytrF 1094705..1096015 (+) 1311 WP_015714561.1 ABC transporter permease YtrF -
  PF977_RS05640 (PF977_05640) braR 1096112..1096807 (+) 696 WP_015714560.1 two-component response regulator BceR Regulator
  PF977_RS05645 (PF977_05645) bceS 1096800..1097804 (+) 1005 WP_003229135.1 two-component sensor histidine kinase BceS -
  PF977_RS05650 (PF977_05650) bceA 1097906..1098667 (+) 762 WP_015714559.1 bacitracin ABC transporter ATP-binding protein BceA -
  PF977_RS05655 (PF977_05655) bceB 1098657..1100597 (+) 1941 WP_015714558.1 bacitracin ABC transporter permease BceB -
  PF977_RS05660 (PF977_05660) yttA 1100634..1101380 (-) 747 WP_015714557.1 LMBR1 domain-containing protein -

Sequence

Protein


Download         Length: 231 a.a.        Molecular weight: 26937.82 Da        Isoelectric Point: 5.3819

>NTDB_id=706860 PF977_RS05640 WP_015714560.1 1096112..1096807(+) (braR) [Bacillus subtilis strain SRCM124333]
MFKLLLIEDDESLFHEIKDRLTGWSYDVYGIQDFSQVLQEFAAVNPDCVIIDVQLPKFDGFHWCRQIRSRSNVPILFLSS
RDHPADMVMSMQLGADDFIQKPFHFDVLIAKIQAMFRRVHHYNTEPSTIKTWCGAAVDAEQNLVSNEKGSVELTKNEMFI
LKQLIEQKNKIVSREELIRSLWNDERFVSDNTLTVNVNRLRKKLEVLQLGAYIETKVGQGYIAKEEDKFYD

Nucleotide


Download         Length: 696 bp        

>NTDB_id=706860 PF977_RS05640 WP_015714560.1 1096112..1096807(+) (braR) [Bacillus subtilis strain SRCM124333]
TTGTTTAAACTTTTGCTGATTGAAGATGATGAATCGCTGTTTCATGAAATCAAGGATCGTTTAACGGGATGGTCCTATGA
TGTATACGGCATTCAGGATTTCAGTCAGGTGCTGCAGGAATTTGCGGCGGTTAATCCTGATTGTGTCATTATTGATGTAC
AGCTGCCTAAATTTGACGGCTTTCATTGGTGCCGGCAGATCCGCTCCCGGTCAAATGTTCCGATTCTCTTTTTATCCTCC
CGGGATCATCCTGCTGATATGGTGATGTCCATGCAGCTCGGGGCAGATGACTTTATCCAAAAGCCATTTCATTTTGATGT
GCTGATTGCGAAAATCCAAGCGATGTTCCGGCGTGTGCACCATTATAATACGGAGCCGAGTACGATTAAAACGTGGTGCG
GCGCTGCTGTAGACGCGGAGCAGAACCTCGTCAGCAATGAAAAAGGATCTGTTGAACTGACCAAAAATGAGATGTTCATT
CTTAAACAACTAATAGAGCAAAAAAACAAGATCGTCAGCCGGGAAGAGCTGATCAGAAGCTTGTGGAACGATGAGCGTTT
TGTTAGTGATAATACGCTGACCGTCAATGTCAATCGCCTGCGAAAAAAACTGGAGGTCCTGCAGCTAGGTGCATATATCG
AGACAAAGGTGGGCCAGGGCTACATCGCGAAGGAAGAGGACAAGTTCTATGATTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(150-222)

Response regulator receiver domain (Response_reg)

(5-113)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

39.545

95.238

0.377