Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   PF977_RS00375 Genome accession   NZ_CP116012
Coordinates   62794..63588 (+) Length   264 a.a.
NCBI ID   WP_003242676.1    Uniprot ID   C0SP91
Organism   Bacillus subtilis strain SRCM124333     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 57794..68588
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF977_RS00355 (PF977_00355) walR 58036..58743 (+) 708 WP_003244363.1 cell wall metabolism DNA-binding response regulator WalR -
  PF977_RS00360 (PF977_00360) walK 58751..60586 (+) 1836 WP_009968432.1 cell wall metabolism sensor histidine kinase WalK -
  PF977_RS00365 (PF977_00365) walH 60576..61943 (+) 1368 WP_003242498.1 WalRK two-component regulatory system regulator WalH -
  PF977_RS00370 (PF977_00370) walI 61930..62772 (+) 843 WP_003244037.1 WalRK two-component regulatory system regulator WalI -
  PF977_RS00375 (PF977_00375) vicX 62794..63588 (+) 795 WP_003242676.1 MBL fold metallo-hydrolase Regulator
  PF977_RS00380 (PF977_00380) htrA 63670..64872 (+) 1203 WP_009969578.1 serine protease HtrC Regulator
  PF977_RS00385 (PF977_00385) - 64892..65022 (+) 131 Protein_73 hypothetical protein -
  PF977_RS00390 (PF977_00390) - 65050..65202 (+) 153 Protein_74 ATP-binding protein -
  PF977_RS00395 (PF977_00395) rocR 65184..66569 (-) 1386 WP_003244510.1 arginine utilization regulatory protein RocR -
  PF977_RS00400 (PF977_00400) - 66800..67084 (+) 285 WP_015715052.1 autorepressor SdpR family transcription factor -
  PF977_RS00405 (PF977_00405) - 67084..67719 (+) 636 WP_041520538.1 SdpI family protein -
  PF977_RS00410 (PF977_00410) - 67903..68457 (+) 555 WP_015715050.1 SdpA family antimicrobial peptide system protein -

Sequence

Protein


Download         Length: 264 a.a.        Molecular weight: 29256.25 Da        Isoelectric Point: 5.8036

>NTDB_id=706833 PF977_RS00375 WP_003242676.1 62794..63588(+) (vicX) [Bacillus subtilis strain SRCM124333]
MSLQFSVLASGSTGNAFYLETEDHAFLVDAGLSGKAMDGLMAQIGRKLDDVDGIFVTHEHSDHIKGLGVVARKYKLPIYA
NEKTWKAMENQIGKIDTDQKFVFPMETVKSFGGLDVESFGVSHDAAEPMFYVFHYSGRKLALMTDTGYVSDRMKGIIRSA
NVFVFESNHDVGMLQMGRYPWSIKRRILSDVGHVSNEDAALAMTDVIGDETSRIYLAHLSQDNNMKELARMSVQQTLASK
GFVTGETFDLYDTDPKKATPLCAV

Nucleotide


Download         Length: 795 bp        

>NTDB_id=706833 PF977_RS00375 WP_003242676.1 62794..63588(+) (vicX) [Bacillus subtilis strain SRCM124333]
ATGAGCTTGCAATTTAGCGTACTTGCGAGCGGGAGTACGGGAAATGCGTTTTACCTCGAAACAGAGGATCACGCATTTTT
AGTGGACGCCGGTTTGAGCGGAAAAGCCATGGATGGGCTGATGGCGCAGATCGGGCGTAAGCTGGATGATGTAGACGGCA
TTTTTGTGACGCATGAGCATAGTGACCATATTAAGGGCCTTGGTGTCGTCGCCAGAAAGTACAAGCTTCCGATCTATGCG
AATGAGAAGACTTGGAAAGCGATGGAGAATCAAATCGGCAAAATTGACACCGATCAAAAGTTTGTATTTCCAATGGAGAC
GGTGAAGTCGTTCGGCGGACTTGATGTTGAATCGTTTGGCGTTTCCCACGATGCGGCGGAACCGATGTTTTATGTATTCC
ATTATAGCGGCCGAAAGCTCGCGTTAATGACAGATACGGGATATGTCAGCGACCGGATGAAAGGCATTATCCGTTCAGCG
AATGTATTTGTGTTTGAAAGCAATCACGATGTCGGTATGCTGCAAATGGGAAGATACCCATGGAGCATTAAGCGGCGGAT
TTTAAGTGACGTCGGGCACGTGTCAAATGAAGATGCTGCCTTGGCGATGACGGATGTCATTGGCGATGAGACGTCTCGTA
TTTACCTGGCGCATTTGAGCCAGGACAACAACATGAAGGAGCTGGCAAGAATGTCTGTGCAGCAGACATTGGCTTCTAAA
GGATTTGTGACGGGTGAGACATTTGACTTATACGACACCGATCCGAAGAAGGCCACTCCGCTTTGCGCTGTATAA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(12-218)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB C0SP91

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

53.435

99.242

0.53