Detailed information NTG0706718

Bioinformatically predicted

Overview

• Name: rapF
• Type: Regulator
• Locus tag: NLV76_RS19115
• Genome accession: NZ_CP100752
• Coordinates: 3725427..3726572 (+)
• Length: 381 a.a.
• NCBI ID: WP_254501766.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain MEC_B301
• Function: inhibit the DNA-binding function of ComA (predicted from homology) Competence regulation

Genomic Context

Location: 3720427..3731572

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
NLV76_RS19095 (NLV76_19095)	-	3721323..3722600 (+)	1278	WP_254501764.1	pitrilysin family protein	-
NLV76_RS19100 (NLV76_19100)	-	3722597..3723298 (+)	702	WP_059353718.1	hypothetical protein	-
NLV76_RS19105 (NLV76_19105)	-	3723305..3723660 (-)	356	Protein_3717	YncE family protein	-
NLV76_RS19110 (NLV76_19110)	-	3723840..3725198 (-)	1359	WP_254501765.1	YncE family protein	-
NLV76_RS19115 (NLV76_19115)	rapF	3725427..3726572 (+)	1146	WP_254501766.1	aspartate phosphatase	Regulator
NLV76_RS19120 (NLV76_19120)	-	3726556..3726675 (+)	120	WP_024123223.1	PhrC/PhrF family phosphatase-inhibitory pheromone	-
NLV76_RS19125 (NLV76_19125)	speB	3726781..3727653 (-)	873	WP_254501767.1	agmatinase	-
NLV76_RS19130 (NLV76_19130)	speE	3727714..3728544 (-)	831	WP_044159821.1	spermidine synthase	-
NLV76_RS19135 (NLV76_19135)	-	3728745..3730820 (+)	2076	WP_254501768.1	transglycosylase domain-containing protein	-
NLV76_RS19140 (NLV76_19140)	-	3730853..3731275 (-)	423	WP_254501769.1	hypothetical protein	-

Sequence

Protein

• Length: 381 a.a.
• Molecular weight: 45430.87 Da
• Isoelectric Point: 4.8428

>NTDB_id=706718 NLV76_RS19115 WP_254501766.1 3725427..3726572(+) (rapF) [Bacillus halotolerans strain MEC_B301]
MSSVISSSSVGEKINEWYMYIRRFSIPDAEYLRREIKQDLDQMEEDQDLHLYYSLMEFRHNLMLEYLEPLENMRIEEQPR
LSDLLLEIDKKQARLTGLLEYYFNFFRGMYELDRREYILAIQFFKKAESKLTFVTDKIDKAEFFFKMSEVYYYMKQTYVS
MDYARQAFEIYNEQTTYDIRMIQCQSLFGANFLDLKQYDKAIAHFQKAYTLAEAAQQPQLMGRTLYNIALCKQNQHSLES
AIEYVKKSIHVFEESKMVPSLPQAFFLITQIYFKLGKIDNACEYHKKGRDYSIAAGDTVYLTEFEFLESLYLSGPDEAAI
EKCFVFLESKMMYADIEDFALDVAKYYHQQENYKKASTYFLKVEEARQHIQGGVNLYEMEV

Nucleotide

• Length: 1146 bp

>NTDB_id=706718 NLV76_RS19115 WP_254501766.1 3725427..3726572(+) (rapF) [Bacillus halotolerans strain MEC_B301]
GTGTCAAGTGTCATATCTTCTTCTTCCGTTGGAGAAAAGATTAATGAATGGTATATGTACATACGCCGATTCAGCATACC
GGATGCGGAATATTTACGAAGAGAAATCAAACAAGACCTGGATCAAATGGAAGAAGACCAGGATCTTCATTTGTATTATT
CACTGATGGAATTCCGGCACAATCTGATGCTTGAGTATCTTGAACCGTTAGAAAACATGCGGATAGAGGAACAGCCGCGA
CTGTCCGATTTGCTGCTTGAAATCGATAAAAAACAGGCTCGTTTAACCGGACTGCTTGAATACTACTTTAATTTCTTCAG
AGGTATGTACGAACTGGACCGCCGGGAATATATATTAGCCATTCAATTTTTTAAAAAAGCAGAGAGCAAACTGACTTTTG
TGACAGATAAAATTGATAAAGCTGAGTTCTTTTTCAAAATGTCAGAAGTTTATTACTATATGAAGCAAACTTATGTGTCC
ATGGACTATGCACGTCAAGCCTTTGAAATATACAACGAACAAACTACATATGATATCAGAATGATTCAATGCCAATCCCT
GTTTGGAGCTAACTTTTTGGATCTGAAACAGTATGATAAAGCAATTGCTCATTTCCAAAAAGCTTATACACTTGCTGAGG
CGGCACAGCAGCCGCAGCTAATGGGAAGAACGCTTTATAATATTGCACTTTGCAAGCAAAACCAACACAGTCTTGAATCA
GCGATAGAGTATGTAAAAAAATCTATTCATGTATTTGAAGAATCGAAAATGGTTCCTTCACTGCCACAAGCTTTTTTCCT
AATTACACAAATTTATTTTAAATTAGGCAAGATTGATAACGCTTGTGAATATCATAAAAAAGGAAGAGATTATTCAATAG
CTGCCGGAGACACTGTGTACTTAACGGAGTTTGAATTTTTGGAATCTTTATACTTGTCTGGACCTGATGAAGCAGCAATA
GAAAAATGTTTTGTTTTCCTTGAAAGTAAAATGATGTATGCTGATATTGAAGACTTTGCACTCGATGTTGCTAAGTATTA
TCATCAGCAGGAAAATTACAAAAAAGCATCTACTTATTTTTTAAAGGTTGAAGAAGCAAGACAGCACATTCAAGGGGGGG
TGAATTTATATGAAATGGAAGTATAA

Domains

Predicted by InterproScan.

• response regulator aspartate phosphatase H, N terminal (RapH_N) (4-65)

• Tetratricopeptide repeat (TPR_8) (193-213)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
rapF	Bacillus subtilis subsp. subtilis str. 168	78.74	100	0.787
rapC	Bacillus subtilis subsp. subtilis str. 168	56.842	99.738	0.567