Detailed information    

insolico Bioinformatically predicted

Overview

Name   rok   Type   Regulator
Locus tag   NLV76_RS08075 Genome accession   NZ_CP100752
Coordinates   1534298..1534873 (+) Length   191 a.a.
NCBI ID   WP_254503320.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   repression of comK (predicted from homology)   
Competence regulation

Genomic Context

Location: 1529298..1539873
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS08045 (NLV76_08045) dapD 1529471..1530181 (+) 711 WP_024121226.1 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase -
  NLV76_RS08050 (NLV76_08050) - 1530252..1531376 (+) 1125 WP_254503317.1 N-acetyldiaminopimelate deacetylase -
  NLV76_RS08055 (NLV76_08055) - 1531437..1531682 (+) 246 WP_010334064.1 YkuS family protein -
  NLV76_RS08060 (NLV76_08060) - 1531717..1532519 (-) 803 Protein_1533 mechanosensitive ion channel family protein -
  NLV76_RS08065 (NLV76_08065) ahpA 1532764..1533306 (+) 543 WP_254503318.1 biofilm-specific peroxidase AhpA -
  NLV76_RS08070 (NLV76_08070) ykuV 1533388..1533846 (+) 459 WP_254503319.1 thiol-disulfide oxidoreductase YkuV -
  NLV76_RS08075 (NLV76_08075) rok 1534298..1534873 (+) 576 WP_254503320.1 transcriptional regulator Rok Regulator
  NLV76_RS08080 (NLV76_08080) - 1534915..1535880 (-) 966 WP_254503321.1 sporulation protein -
  NLV76_RS08085 (NLV76_08085) - 1536013..1536612 (+) 600 WP_254503322.1 molybdenum cofactor guanylyltransferase -
  NLV76_RS08090 (NLV76_08090) - 1536664..1537683 (+) 1020 WP_254503323.1 molybdopterin-synthase adenylyltransferase MoeB -
  NLV76_RS08095 (NLV76_08095) glp 1537701..1538993 (+) 1293 WP_254503324.1 gephyrin-like molybdotransferase Glp -
  NLV76_RS08100 (NLV76_08100) mobB 1538954..1539475 (+) 522 WP_254503325.1 molybdopterin-guanine dinucleotide biosynthesis protein B -

Sequence

Protein


Download         Length: 191 a.a.        Molecular weight: 21785.76 Da        Isoelectric Point: 9.8783

>NTDB_id=706674 NLV76_RS08075 WP_254503320.1 1534298..1534873(+) (rok) [Bacillus halotolerans strain MEC_B301]
MFNEREALRLRLEQLNEAEVKVIREYQIERDKIYAKLRELDRNGSPSEVKKDFRSERKTDSLPVLADLAAQEIRSYQPPS
QQQSVQPQLQSISSLPAGIPDGTTRRRRGTARPGSKAAKLREAAIKTLKRHNAAIKSSELQKEIEKESGLEIPNMTTFMQ
SLIKMYPEVKKPYRGQYILEGDIESAESATE

Nucleotide


Download         Length: 576 bp        

>NTDB_id=706674 NLV76_RS08075 WP_254503320.1 1534298..1534873(+) (rok) [Bacillus halotolerans strain MEC_B301]
ATGTTTAATGAAAGAGAAGCTTTGCGCTTGCGATTAGAACAATTAAATGAAGCTGAAGTGAAAGTCATTCGTGAATATCA
AATTGAACGCGATAAAATATACGCTAAATTAAGAGAGCTGGACAGAAATGGAAGCCCTTCCGAAGTCAAAAAGGATTTCC
GTTCTGAACGAAAAACTGACTCTCTGCCGGTTCTCGCTGACCTTGCGGCTCAGGAAATCAGAAGCTATCAGCCGCCATCA
CAGCAGCAGTCTGTTCAGCCTCAGCTTCAATCTATTTCCTCTCTTCCTGCCGGTATACCAGACGGAACAACACGAAGAAG
AAGAGGAACGGCAAGACCGGGATCTAAAGCAGCTAAACTGCGTGAAGCGGCTATTAAAACATTAAAACGCCACAACGCGG
CAATTAAAAGCTCTGAACTTCAAAAAGAGATTGAAAAGGAAAGCGGTCTTGAAATCCCTAATATGACAACATTTATGCAA
AGTTTAATTAAAATGTATCCGGAAGTGAAAAAACCGTATCGCGGCCAGTACATTTTAGAGGGTGACATCGAATCAGCTGA
ATCAGCAACAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  rok Bacillus subtilis subsp. subtilis str. 168

96.335

100

0.963