Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NLV76_RS07970 Genome accession   NZ_CP100752
Coordinates   1517696..1518160 (-) Length   154 a.a.
NCBI ID   WP_024121211.1    Uniprot ID   A0A9Q6A820
Organism   Bacillus halotolerans strain MEC_B301     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1512696..1523160
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS07950 (NLV76_07950) kinA 1513158..1514978 (+) 1821 WP_254503309.1 sporulation histidine kinase KinA -
  NLV76_RS07955 (NLV76_07955) - 1515002..1516171 (-) 1170 WP_024121208.1 aminotransferase A -
  NLV76_RS07960 (NLV76_07960) - 1516373..1516534 (-) 162 WP_003238943.1 hypothetical protein -
  NLV76_RS07965 (NLV76_07965) cheV 1516742..1517653 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  NLV76_RS07970 (NLV76_07970) kre 1517696..1518160 (-) 465 WP_024121211.1 YkyB family protein Regulator
  NLV76_RS07975 (NLV76_07975) - 1518286..1519578 (-) 1293 WP_059335883.1 MFS transporter -
  NLV76_RS07980 (NLV76_07980) - 1519654..1520148 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  NLV76_RS07985 (NLV76_07985) - 1520206..1521066 (-) 861 WP_254503310.1 metallophosphoesterase -
  NLV76_RS07990 (NLV76_07990) fadH 1521211..1521975 (+) 765 WP_044156076.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17884.73 Da        Isoelectric Point: 10.4658

>NTDB_id=706673 NLV76_RS07970 WP_024121211.1 1517696..1518160(-) (kre) [Bacillus halotolerans strain MEC_B301]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=706673 NLV76_RS07970 WP_024121211.1 1517696..1518160(-) (kre) [Bacillus halotolerans strain MEC_B301]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.052

100

0.981