Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NLV76_RS06270 Genome accession   NZ_CP100752
Coordinates   1228187..1229338 (+) Length   383 a.a.
NCBI ID   WP_302329774.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1223187..1234338
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS06240 (NLV76_06240) - 1223855..1225072 (+) 1218 WP_254503605.1 MFS transporter -
  NLV76_RS06245 (NLV76_06245) - 1225239..1225817 (+) 579 WP_059293039.1 GNAT family N-acetyltransferase -
  NLV76_RS06250 (NLV76_06250) spx 1225997..1226392 (+) 396 WP_010333748.1 transcriptional regulator Spx -
  NLV76_RS06255 (NLV76_06255) - 1226438..1227094 (-) 657 WP_254503018.1 TerC family protein -
  NLV76_RS06260 (NLV76_06260) - 1227266..1227406 (+) 141 WP_125825429.1 hypothetical protein -
  NLV76_RS06265 (NLV76_06265) mecA 1227373..1228029 (+) 657 WP_193660369.1 adaptor protein MecA Regulator
  NLV76_RS06270 (NLV76_06270) coiA 1228187..1229338 (+) 1152 WP_302329774.1 competence protein CoiA family protein Machinery gene
  NLV76_RS06275 (NLV76_06275) pepF 1229568..1231397 (+) 1830 WP_254503019.1 oligoendopeptidase F -
  NLV76_RS06280 (NLV76_06280) - 1231434..1231601 (-) 168 WP_024120925.1 hypothetical protein -
  NLV76_RS06285 (NLV76_06285) spxH 1231915..1232814 (-) 900 WP_044156379.1 protease adaptor protein SpxH -
  NLV76_RS06290 (NLV76_06290) - 1232811..1233209 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  NLV76_RS06295 (NLV76_06295) - 1233466..1234197 (-) 732 WP_254503020.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44785.94 Da        Isoelectric Point: 9.8406

>NTDB_id=706669 NLV76_RS06270 WP_302329774.1 1228187..1229338(+) (coiA) [Bacillus halotolerans strain MEC_B301]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEDLDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQMASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGMIPQWILGGSRLKRTSSSFYQLSAF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFFTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGPVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=706669 NLV76_RS06270 WP_302329774.1 1228187..1229338(+) (coiA) [Bacillus halotolerans strain MEC_B301]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTCATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
GTTTTTCTGCCCGGTGTGTGCTGAGGACCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCCTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAATGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGAATGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATGCAAGTCCGAACAGTGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTTCACTGAACCAGATTCGTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGGTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGACCTGTTTTTAAGAGTCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGCTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTCTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGGAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.335

97.389

0.734