Detailed information    

insolico Bioinformatically predicted

Overview


Name   med   Type   Regulator
Locus tag   NLV76_RS06150 Genome accession   NZ_CP100752
Coordinates   1204935..1205888 (+) Length   317 a.a.
NCBI ID   WP_193660367.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context


Location: 1199935..1210888
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS06125 (NLV76_06125) argF 1201734..1202690 (+) 957 WP_254503003.1 ornithine carbamoyltransferase -
  NLV76_RS06130 (NLV76_06130) - 1202792..1202971 (+) 180 WP_003239319.1 YjzC family protein -
  NLV76_RS06135 (NLV76_06135) - 1203017..1203202 (-) 186 WP_010333727.1 YjzD family protein -
  NLV76_RS06140 (NLV76_06140) - 1203461..1204198 (+) 738 WP_059352722.1 hypothetical protein -
  NLV76_RS06145 (NLV76_06145) - 1204281..1204844 (+) 564 WP_059336279.1 hypothetical protein -
  NLV76_RS06150 (NLV76_06150) med 1204935..1205888 (+) 954 WP_193660367.1 BMP family ABC transporter substrate-binding protein Regulator
  NLV76_RS06155 (NLV76_06155) comZ 1205903..1206094 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NLV76_RS06160 (NLV76_06160) - 1206124..1206354 (-) 231 WP_082687943.1 hypothetical protein -
  NLV76_RS06165 (NLV76_06165) fabH 1206520..1207458 (+) 939 WP_254503004.1 beta-ketoacyl-ACP synthase III -
  NLV76_RS06170 (NLV76_06170) fabF 1207481..1208719 (+) 1239 WP_254503005.1 beta-ketoacyl-ACP synthase II -
  NLV76_RS06175 (NLV76_06175) - 1208799..1209584 (+) 786 WP_254503006.1 DUF2268 domain-containing protein -
  NLV76_RS06180 (NLV76_06180) appD 1209775..1210761 (+) 987 WP_254503007.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence


Protein


Download         Length: 317 a.a.        Molecular weight: 35224.86 Da        Isoelectric Point: 4.8692

>NTDB_id=706664 NLV76_RS06150 WP_193660367.1 1204935..1205888(+) (med) [Bacillus halotolerans strain MEC_B301]
MITRLVMIFSVLLLLSGCGQTPFKGKIEKVGMLFPDTINDLVWGTKGYKGLLNIQSTYNVDVYYKEGVKTDEDIINAIED
FHKRGVNLLFGHGSEYEEVFNLVSEDYPDMQFVISNAKAKADNVTSVHLSGEAIGFFGGMTAAHMSKTNQVGVIASFSWQ
PEVDGFIKGAKYENPNIEVNTKYTDHWDDDSTAVNLYQKMKNEGADVVYPAGDGYNVPVIQQIKKDGLYAIGYVTDQSDL
GENTVLTSTVQNVDKAYEIIAEQFDKGTLKGGDHYYDLKSRVVEMGTFSPLVDKAIQKKIAKLVKTYNKTGELPKNE

Nucleotide


Download         Length: 954 bp        

>NTDB_id=706664 NLV76_RS06150 WP_193660367.1 1204935..1205888(+) (med) [Bacillus halotolerans strain MEC_B301]
TTGATCACAAGGCTTGTCATGATCTTTTCTGTCCTCCTTTTATTAAGCGGATGTGGACAAACTCCGTTTAAAGGAAAAAT
TGAGAAGGTCGGCATGCTCTTTCCTGATACGATTAATGACCTCGTATGGGGCACAAAAGGGTATAAAGGATTACTGAATA
TACAATCTACATACAATGTGGACGTCTACTATAAAGAAGGCGTAAAAACAGATGAAGATATTATAAATGCGATTGAAGAT
TTTCATAAGCGCGGCGTCAATCTCCTCTTTGGCCATGGAAGTGAGTATGAAGAAGTATTTAACTTGGTGAGTGAAGACTA
TCCGGATATGCAGTTTGTGATTTCAAACGCAAAAGCTAAAGCGGACAATGTCACAAGCGTTCATCTCAGCGGGGAAGCAA
TCGGCTTTTTCGGCGGAATGACCGCTGCCCATATGTCAAAAACCAATCAGGTCGGCGTCATCGCTTCTTTTTCATGGCAG
CCAGAAGTTGACGGCTTTATAAAAGGGGCTAAGTATGAAAATCCTAATATAGAAGTGAATACAAAATATACGGATCACTG
GGATGATGATTCGACTGCGGTGAACCTTTATCAAAAAATGAAGAACGAAGGCGCGGATGTTGTGTATCCTGCCGGAGACG
GGTATAATGTTCCTGTCATTCAGCAAATCAAAAAAGACGGCCTATATGCGATCGGCTATGTCACAGATCAATCCGATCTT
GGCGAGAACACCGTGTTAACCAGCACGGTGCAAAATGTGGACAAGGCCTATGAAATTATAGCTGAGCAATTCGACAAAGG
CACTTTAAAAGGCGGCGATCACTATTACGATCTGAAAAGCCGAGTTGTCGAAATGGGAACCTTCAGTCCGCTTGTAGACA
AAGCCATTCAGAAAAAAATCGCCAAACTGGTCAAAACATATAACAAAACAGGTGAACTGCCAAAAAACGAGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  med Bacillus subtilis subsp. subtilis str. 168

92.744

100

0.927