Detailed information    

insolico Bioinformatically predicted

Overview

Name   comS   Type   Regulator
Locus tag   NLV76_RS02050 Genome accession   NZ_CP100752
Coordinates   394076..394216 (+) Length   46 a.a.
NCBI ID   WP_223203921.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   preventing the degradation of ComK (predicted from homology)   
Competence regulation

Genomic Context

Location: 389076..399216
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS02045 (NLV76_02045) srfAB 391009..393984 (+) 2976 Protein_358 surfactin non-ribosomal peptide synthetase SrfAB -
  NLV76_RS02050 (NLV76_02050) comS 394076..394216 (+) 141 WP_223203921.1 competence protein ComS Regulator
  NLV76_RS02055 (NLV76_02055) - 394162..395517 (+) 1356 Protein_360 condensation domain-containing protein -

Sequence

Protein


Download         Length: 46 a.a.        Molecular weight: 5202.01 Da        Isoelectric Point: 9.3565

>NTDB_id=706652 NLV76_RS02050 WP_223203921.1 394076..394216(+) (comS) [Bacillus halotolerans strain MEC_B301]
MNRSGKHLISSIILFPRPSGECTSSISLDKQAQATTSLLYFCWREK

Nucleotide


Download         Length: 141 bp        

>NTDB_id=706652 NLV76_RS02050 WP_223203921.1 394076..394216(+) (comS) [Bacillus halotolerans strain MEC_B301]
TTGAACCGATCAGGCAAGCACCTTATCAGCAGCATTATCCTGTTTCCCCGGCCCAGCGGAGAATGTACATCCTCAATCAG
CTTGGACAAGCAAGCACAAGCTACAACGTCCCTGCTGTACTTTTGCTGGAGGGAGAAGTAA

Domains

Predicted by InterproScan.

Bacillus competence protein S (ComS)

(1-44)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comS Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913