Detailed information    

insolico Bioinformatically predicted

Overview

Name   nin/comJ   Type   Regulator
Locus tag   NLV76_RS02010 Genome accession   NZ_CP100752
Coordinates   374916..375314 (-) Length   132 a.a.
NCBI ID   WP_254502396.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B301     
Function   represses the expression of nucA (predicted from homology)   
Competence regulation

Genomic Context

Location: 369916..380314
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLV76_RS01980 (NLV76_01980) - 370869..371324 (+) 456 WP_254502389.1 RDD family protein -
  NLV76_RS01985 (NLV76_01985) - 371406..371741 (+) 336 WP_095714430.1 YckD family protein -
  NLV76_RS01990 (NLV76_01990) - 371881..372300 (+) 420 WP_254502390.1 MarR family winged helix-turn-helix transcriptional regulator -
  NLV76_RS01995 (NLV76_01995) - 372291..372629 (+) 339 WP_254502392.1 DUF3147 family protein -
  NLV76_RS02000 (NLV76_02000) - 372646..373374 (+) 729 WP_202656656.1 AAA family ATPase -
  NLV76_RS02005 (NLV76_02005) - 373447..374880 (+) 1434 WP_254502394.1 glycoside hydrolase family 1 protein -
  NLV76_RS02010 (NLV76_02010) nin/comJ 374916..375314 (-) 399 WP_254502396.1 competence protein ComJ Regulator
  NLV76_RS02015 (NLV76_02015) nucA/comI 375341..375778 (-) 438 WP_069487487.1 DNA-entry nuclease Machinery gene
  NLV76_RS02020 (NLV76_02020) tlpC 375964..377688 (-) 1725 WP_254502397.1 methyl-accepting chemotaxis protein TlpC -
  NLV76_RS02025 (NLV76_02025) hxlB 377797..378354 (-) 558 WP_044161924.1 6-phospho-3-hexuloisomerase -
  NLV76_RS02030 (NLV76_02030) hxlA 378360..378992 (-) 633 WP_254502399.1 3-hexulose-6-phosphate synthase -
  NLV76_RS02035 (NLV76_02035) hxlR 379224..379586 (+) 363 WP_254502401.1 transcriptional activator HxlR -

Sequence

Protein


Download         Length: 132 a.a.        Molecular weight: 14929.81 Da        Isoelectric Point: 4.5022

>NTDB_id=706650 NLV76_RS02010 WP_254502396.1 374916..375314(-) (nin/comJ) [Bacillus halotolerans strain MEC_B301]
MIKSWKPQELTISYHQFTVFQKGSAPPVIDWTDEAIEKGYAEADEAISFEAQRNSKVYILLRLNSSETVASYEKKVTVPF
HVTTDGIEIESIMSKRLSFDLPKGDYQFTCYTVPAEPSDLHADTYIIDAVSV

Nucleotide


Download         Length: 399 bp        

>NTDB_id=706650 NLV76_RS02010 WP_254502396.1 374916..375314(-) (nin/comJ) [Bacillus halotolerans strain MEC_B301]
TTGATCAAATCATGGAAGCCGCAAGAACTGACGATTTCATATCATCAATTTACTGTATTTCAAAAGGGTTCCGCACCGCC
AGTCATCGATTGGACAGATGAAGCAATTGAAAAAGGTTATGCGGAAGCGGACGAAGCCATTTCGTTTGAGGCACAGCGGA
ATTCAAAGGTATATATTCTTTTGCGCCTTAACAGTTCAGAAACAGTTGCATCCTATGAAAAAAAAGTGACTGTTCCTTTT
CACGTCACAACAGACGGAATTGAAATTGAAAGCATCATGTCCAAGAGGCTGTCCTTTGACCTTCCTAAAGGAGACTATCA
ATTCACATGCTACACTGTACCAGCTGAGCCGTCAGATCTGCACGCTGACACTTATATCATTGATGCTGTTTCCGTCTAA

Domains

Predicted by InterproScan.

Competence protein J (ComJ) (ComJ)

(9-129)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  nin/comJ Bacillus subtilis subsp. subtilis str. 168

87.121

100

0.871