Detailed information
Bioinformatically predicted
Overview
| Name | clpC | Type | Regulator |
| Locus tag | NLV76_RS00575 | Genome accession | NZ_CP100752 |
| Coordinates | 103223..105655 (+) | Length | 810 a.a. |
| NCBI ID | WP_254502116.1 | Uniprot ID | - |
| Organism | Bacillus halotolerans strain MEC_B301 | ||
| Function | degradation of ComK; degradation of DegU (predicted from homology) Competence regulation |
||
Genomic Context
Location: 98223..110655
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NLV76_RS00560 (NLV76_00560) | ctsR | 101100..101564 (+) | 465 | WP_010332747.1 | transcriptional regulator CtsR | - |
| NLV76_RS00565 (NLV76_00565) | mcsA | 101578..102135 (+) | 558 | WP_059352657.1 | protein-arginine kinase activator protein McsA | - |
| NLV76_RS00570 (NLV76_00570) | - | 102135..103226 (+) | 1092 | WP_044153449.1 | protein arginine kinase | - |
| NLV76_RS00575 (NLV76_00575) | clpC | 103223..105655 (+) | 2433 | WP_254502116.1 | ATP-dependent protease ATP-binding subunit ClpC | Regulator |
| NLV76_RS00580 (NLV76_00580) | radA | 105747..107123 (+) | 1377 | WP_044153447.1 | DNA repair protein RadA | Machinery gene |
| NLV76_RS00585 (NLV76_00585) | disA | 107127..108209 (+) | 1083 | WP_254502118.1 | DNA integrity scanning diadenylate cyclase DisA | - |
| NLV76_RS00590 (NLV76_00590) | - | 108329..109429 (+) | 1101 | WP_059291688.1 | PIN/TRAM domain-containing protein | - |
| NLV76_RS00595 (NLV76_00595) | ispD | 109444..110142 (+) | 699 | WP_254502120.1 | 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase | - |
| NLV76_RS00600 (NLV76_00600) | ispF | 110135..110611 (+) | 477 | WP_254502122.1 | 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase | - |
Sequence
Protein
Download Length: 810 a.a. Molecular weight: 90052.59 Da Isoelectric Point: 6.1830
>NTDB_id=706647 NLV76_RS00575 WP_254502116.1 103223..105655(+) (clpC) [Bacillus halotolerans strain MEC_B301]
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVETLIGRGQEMSQTIHY
TPRPKKVIDLSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTDLARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEDLLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
MMFGRFTERAQKVLALAQEEALRLGHNNIGTEHILLGLVREGEGIAAKALQALGLGSDKIQKEVETLIGRGQEMSQTIHY
TPRPKKVIDLSMDEARKLGHSYVGTEHILLGLIREGEGVAARVLNNLGVSLNKARQQVLQLLGSNETGSSAAGTNSNANT
PTLDSLARDLTAIAKEDSLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAEGLAQQIINNEVPEILRDKRVM
TLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNIILFIDELHTLIGAGGAEGAIDASNILKPSLARGELQCIGATTLDEY
RKYIEKDAALERRFQPIQVDQPSVDESIQILKGLRDRYEAHHRVSITDEAIEAAVKLSDRYISDRFLPDKAIDLIDEAGS
KVRLRSFTTPPNLKELEQKLDEVRKEKDAAVQSQEFEKAASLRDTEQRLREQVEDTKKSWKEKQGQENSEVSVDDIAMVV
SSWTGVPVSKIAQTETDKLLNMESILHSRVIGQDEAVVAVAKAVRRARAGLKDPKRPIGSFIFLGPTGVGKTDLARALAE
SIFGDEEAMIRIDMSEYMEKHSTSRLVGSPPGYVGYDEGGQLTEKVRRKPYSVVLLDEIEKAHPDVFNILLQVLEDGRLT
DSKGRTVDFRNTILIMTSNVGASELKRNKYVGFNVQDETQNHKDMKDKVMGELKRAFRPEFINRIDEIIVFHSLEKKHLA
EIVSLMSDQLTKRLKEQDLSIELTEAAKAKVAEEGVDLEYGARPLRRAIQKHVEDRLSEDLLRGNIHKGHHIVLDVEDGE
FVVKTTAKTN
Nucleotide
Download Length: 2433 bp
>NTDB_id=706647 NLV76_RS00575 WP_254502116.1 103223..105655(+) (clpC) [Bacillus halotolerans strain MEC_B301]
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAAGAAGAAGCACTTCGTTTAGGTCATAA
CAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGACCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGACCTAAAAAAGTCATTGACCTTTCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGCTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGAGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTTATGGATGA
AATCCGTCAGGCAGGAAACATCATTCTATTCATTGATGAGCTCCATACTTTAATTGGAGCGGGCGGAGCAGAAGGTGCAA
TAGATGCTTCTAACATTTTAAAGCCTTCACTTGCTCGCGGAGAACTTCAGTGCATCGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCGGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGACTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTGGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAAAAAGCGGCTTCCTTGCGTGATACAGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACCGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCGGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATATTCTTAGGCCCTACAGGTGTAGGTAAAACAGACCTTGCACGAGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTTCTTGAGGACGGACGATTGACT
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGTTTCAACGTTCAGGATGAGACACAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAATTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTTGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGACCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCGGAAGAGGGCGTAGATCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCTGAAGACCTGCTCAGAGGTAACATTCATAAAGGGCACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACAGCTAAAACGAATTAA
ATGATGTTTGGAAGATTTACAGAACGAGCTCAAAAGGTACTGGCGCTTGCACAAGAAGAAGCACTTCGTTTAGGTCATAA
CAATATCGGCACTGAGCATATTTTATTAGGACTGGTGCGAGAAGGAGAGGGCATCGCTGCTAAAGCACTTCAAGCGCTTG
GACTTGGTTCAGATAAAATCCAAAAAGAAGTTGAGACCTTAATTGGGCGCGGACAGGAAATGTCTCAAACGATTCATTAT
ACTCCGAGACCTAAAAAAGTCATTGACCTTTCAATGGATGAGGCCAGAAAACTCGGCCATTCTTATGTGGGAACAGAGCA
TATTCTTCTTGGACTTATTCGCGAAGGTGAAGGTGTGGCTGCGAGAGTGCTTAACAATCTCGGAGTCAGCTTAAATAAAG
CAAGACAGCAAGTGCTTCAGCTTCTTGGAAGTAATGAAACAGGCTCATCAGCGGCTGGAACAAACAGCAATGCGAATACG
CCTACACTAGATAGCCTGGCAAGAGATTTAACAGCGATTGCGAAGGAAGACAGCCTTGATCCGGTTATCGGCAGAAGCAA
AGAAATTCAGCGTGTCATTGAAGTGCTGAGCCGCAGAACGAAAAACAATCCTGTTCTGATTGGAGAACCGGGCGTAGGGA
AAACGGCTATCGCAGAAGGTCTTGCACAGCAAATTATCAATAATGAAGTTCCCGAAATTTTACGGGATAAACGCGTTATG
ACATTAGACATGGGAACAGTTGTTGCCGGTACGAAATATCGCGGTGAATTTGAGGACCGCTTGAAAAAAGTTATGGATGA
AATCCGTCAGGCAGGAAACATCATTCTATTCATTGATGAGCTCCATACTTTAATTGGAGCGGGCGGAGCAGAAGGTGCAA
TAGATGCTTCTAACATTTTAAAGCCTTCACTTGCTCGCGGAGAACTTCAGTGCATCGGTGCGACAACTCTTGATGAGTAC
CGTAAATATATTGAAAAAGATGCGGCTCTGGAACGCCGTTTTCAGCCAATCCAGGTTGATCAGCCGTCTGTAGACGAAAG
CATTCAAATCCTAAAAGGCTTGCGTGACCGATATGAAGCCCACCACCGCGTTTCTATCACTGACGAAGCCATTGAGGCTG
CGGTTAAGCTTTCTGACAGATATATCTCTGACCGTTTCCTTCCGGATAAAGCTATTGACTTGATCGATGAAGCGGGTTCA
AAGGTCAGACTGCGTTCCTTTACAACGCCTCCTAATTTAAAAGAGCTGGAACAGAAACTTGATGAAGTTCGTAAAGAGAA
GGATGCTGCGGTGCAAAGCCAAGAATTTGAAAAAGCGGCTTCCTTGCGTGATACAGAACAGCGTTTGCGTGAACAAGTGG
AAGATACGAAAAAATCATGGAAAGAGAAGCAGGGACAGGAAAACTCAGAGGTTTCTGTGGATGATATTGCGATGGTTGTA
TCCAGCTGGACCGGGGTGCCTGTATCTAAAATCGCCCAAACTGAAACCGATAAGCTTCTTAATATGGAGAGCATTCTTCA
TTCCCGTGTCATCGGCCAAGATGAAGCGGTTGTAGCCGTTGCTAAAGCGGTCAGACGTGCAAGAGCAGGGCTAAAAGATC
CTAAACGCCCAATCGGCTCATTCATATTCTTAGGCCCTACAGGTGTAGGTAAAACAGACCTTGCACGAGCACTTGCTGAG
TCTATCTTCGGTGATGAAGAAGCCATGATCAGAATTGATATGTCTGAATACATGGAAAAACACTCGACTTCTAGACTTGT
AGGTTCACCTCCAGGGTATGTGGGATACGATGAAGGCGGCCAATTAACAGAGAAGGTAAGAAGAAAACCATACTCTGTCG
TGCTTCTTGATGAGATTGAGAAAGCGCACCCTGACGTCTTCAATATCCTCCTTCAAGTTCTTGAGGACGGACGATTGACT
GATTCTAAAGGCCGTACAGTTGATTTCCGCAACACGATTCTGATCATGACGTCAAACGTCGGAGCAAGTGAGCTGAAACG
CAACAAATATGTCGGTTTCAACGTTCAGGATGAGACACAAAATCATAAAGACATGAAGGATAAAGTGATGGGTGAATTGA
AACGTGCGTTCAGACCGGAATTCATCAACCGTATTGATGAAATTATCGTCTTCCATTCACTTGAGAAAAAACATCTGGCT
GAAATCGTGTCATTGATGTCTGATCAATTAACGAAACGTCTTAAAGAACAGGACCTTTCTATTGAATTGACGGAAGCTGC
GAAAGCAAAAGTCGCGGAAGAGGGCGTAGATCTTGAATACGGTGCCCGCCCGCTCAGAAGAGCCATTCAAAAACATGTGG
AGGATCGTTTATCTGAAGACCTGCTCAGAGGTAACATTCATAAAGGGCACCATATCGTTCTTGATGTAGAAGATGGCGAA
TTTGTCGTAAAAACGACAGCTAAAACGAATTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpC | Bacillus subtilis subsp. subtilis str. 168 |
98.272 |
100 |
0.983 |
| clpC | Lactococcus lactis subsp. lactis strain DGCC12653 |
50 |
99.012 |
0.495 |
| clpC | Streptococcus thermophilus LMD-9 |
46.163 |
100 |
0.475 |
| clpC | Streptococcus thermophilus LMG 18311 |
45.923 |
100 |
0.473 |
| clpC | Streptococcus pneumoniae Rx1 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae D39 |
45.241 |
99.877 |
0.452 |
| clpC | Streptococcus pneumoniae TIGR4 |
45.117 |
99.877 |
0.451 |
| clpC | Streptococcus mutans UA159 |
43.22 |
100 |
0.441 |
| clpC | Lactococcus lactis subsp. cremoris KW2 |
47.773 |
91.481 |
0.437 |
| clpE | Streptococcus mutans UA159 |
53.005 |
80.123 |
0.425 |
| clpE | Streptococcus pneumoniae TIGR4 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae Rx1 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae D39 |
53.612 |
76.914 |
0.412 |
| clpE | Streptococcus pneumoniae R6 |
53.612 |
76.914 |
0.412 |