Detailed information NTG0706618

Bioinformatically predicted

Overview

• Name: cytR
• Type: Regulator
• Locus tag: PIB26_RS21365
• Genome accession: NZ_CP115968
• Coordinates: 4396360..4397385 (+)
• Length: 341 a.a.
• NCBI ID: WP_000644904.1
• Uniprot ID: P0ACN8
• Organism: Escherichia coli strain B-DidR
• Function: promote competence gene expression (predicted from homology) Competence regulation

Genomic Context

Location: 4391360..4402385

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
PIB26_RS21340	metJ	4391797..4392114 (+)	318	WP_000852812.1	met regulon transcriptional regulator MetJ	-
PIB26_RS21345	yiiX	4392298..4392906 (+)	609	WP_000797341.1	YiiX family permuted papain-like enzyme	-
PIB26_RS21350	-	4392913..4393536 (+)	624	WP_000720774.1	TIGR02117 family protein	-
PIB26_RS21355	rpmE	4393591..4393803 (-)	213	WP_000710769.1	50S ribosomal protein L31	-
PIB26_RS21360	priA	4394006..4396204 (+)	2199	WP_001301269.1	primosomal protein N'	Machinery gene
PIB26_RS21365	cytR	4396360..4397385 (+)	1026	WP_000644904.1	DNA-binding transcriptional regulator CytR	Regulator
PIB26_RS21370	ftsN	4397477..4398436 (+)	960	WP_000068828.1	cell division protein FtsN	-
PIB26_RS21375	hslV	4398529..4399059 (+)	531	WP_000208242.1	ATP-dependent protease subunit HslV	-
PIB26_RS21380	hslU	4399069..4400400 (+)	1332	WP_001293341.1	HslU--HslV peptidase ATPase subunit	-
PIB26_RS21385	menA	4400467..4401393 (+)	927	WP_000139496.1	1,4-dihydroxy-2-naphthoate polyprenyltransferase	-
PIB26_RS21390	rraA	4401486..4401971 (+)	486	WP_000872908.1	ribonuclease E activity regulator RraA	-
PIB26_RS21395	zapB	4402056..4402301 (-)	246	WP_001296623.1	septal ring assembly protein ZapB	-

Sequence

Protein

• Length: 341 a.a.
• Molecular weight: 37819.78 Da
• Isoelectric Point: 6.3842

>NTDB_id=706618 PIB26_RS21365 WP_000644904.1 4396360..4397385(+) (cytR) [Escherichia coli strain B-DidR]
MKAKKQETAATMKDVALKAKVSTATVSRALMNPDKVSQATRNRVEKAAREVGYLPQPMGRNVKRNESRTILVIVPDICDP
FFSEIIRGIEVTAANHGYLVLIGDCAHQNQQEKTFIDLIITKQIDGMLLLGSRLPFDASIEEQRNLPPMVMANEFAPELE
LPTVHIDNLTAAFDAVNYLYEQGHKRIGCIAGPEEMPLCHYRLQGYVQALRRCGIMVDPQYIARGDFTFEAGSKAMQQLL
DLPQPPTAVFCHSDVMALGALSQAKRQGLKVPEDLSIIGFDNIDLTQFCDPPLTTIAQPRYEIGREAMLLLLDQMQGQHV
GSGSRLMDCELIIRGSTRALP

Nucleotide

• Length: 1026 bp

>NTDB_id=706618 PIB26_RS21365 WP_000644904.1 4396360..4397385(+) (cytR) [Escherichia coli strain B-DidR]
GTGAAAGCGAAGAAGCAGGAAACTGCCGCGACCATGAAAGACGTTGCCCTCAAGGCAAAAGTCTCTACAGCGACCGTCTC
CCGAGCATTAATGAATCCCGATAAAGTCTCCCAGGCCACCCGTAATCGGGTTGAAAAAGCGGCCCGGGAAGTGGGTTATT
TACCGCAGCCTATGGGGCGCAACGTCAAGCGTAATGAATCCCGCACCATTCTGGTGATTGTCCCGGATATCTGCGATCCC
TTCTTTAGCGAAATTATTCGCGGTATCGAAGTTACGGCGGCAAATCACGGATATCTGGTGCTGATTGGCGACTGTGCGCA
TCAAAATCAGCAGGAAAAAACCTTTATCGATTTGATCATCACCAAGCAAATTGATGGCATGTTGTTGCTGGGTTCAAGGC
TGCCGTTTGATGCCAGCATTGAGGAACAGCGTAATCTGCCGCCGATGGTGATGGCGAACGAATTTGCACCGGAGCTGGAG
CTGCCTACAGTTCATATCGACAATCTGACCGCCGCATTTGATGCAGTAAATTATTTATATGAGCAAGGGCATAAACGGAT
TGGCTGTATAGCCGGTCCCGAAGAGATGCCGCTGTGTCACTACCGCCTGCAAGGCTATGTTCAGGCGCTGCGTCGCTGCG
GCATTATGGTTGATCCGCAATACATCGCCCGTGGCGACTTCACCTTCGAAGCCGGAAGCAAAGCGATGCAGCAGCTGCTT
GATCTTCCACAACCGCCTACTGCTGTCTTCTGCCATAGCGATGTGATGGCGCTCGGCGCACTTTCTCAGGCAAAACGCCA
GGGGCTGAAAGTCCCGGAAGACCTTTCCATAATCGGTTTTGATAACATCGACCTGACGCAATTTTGTGATCCGCCGCTGA
CAACCATCGCGCAGCCGCGTTACGAAATCGGTCGGGAAGCTATGCTGTTATTGCTTGATCAAATGCAGGGGCAACACGTT
GGCAGTGGCTCTCGTTTAATGGACTGCGAACTTATCATCCGGGGATCAACACGCGCGTTACCTTAA

Domains

Predicted by InterProScan.

• Bacterial regulatory proteins, lacI family (LacI) (11-56)

• Periplasmic binding protein-like domain (Peripla_BP_3) (176-337)

3D structure

• AlphaFold DB: P0ACN8

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
cytR	Vibrio parahaemolyticus RIMD 2210633	64.179	98.24	0.63
cytR	Vibrio cholerae C6706	65.443	95.894	0.628