Detailed information    

insolico Bioinformatically predicted

Overview

Name   mutX   Type   Machinery gene
Locus tag   H7677_RS04125 Genome accession   NZ_AP023391
Coordinates   839546..840028 (-) Length   160 a.a.
NCBI ID   WP_024381385.1    Uniprot ID   -
Organism   Streptococcus suis strain DAT299     
Function   DNA mismatch repair (predicted from homology)   
Homologous recombination

Genomic Context

Location: 834546..845028
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7677_RS04100 (DAT299_07630) pheT 834842..837241 (+) 2400 WP_184494223.1 phenylalanine--tRNA ligase subunit beta -
  H7677_RS04105 (DAT299_07640) - 837296..837562 (+) 267 WP_184494225.1 DUF2087 domain-containing protein -
  H7677_RS04110 (DAT299_07650) - 837583..837885 (-) 303 WP_184494227.1 hypothetical protein -
  H7677_RS04115 (DAT299_07660) - 838090..838833 (+) 744 WP_184494229.1 polyphosphate polymerase domain-containing protein -
  H7677_RS04120 (DAT299_07670) - 838820..839497 (+) 678 WP_024403147.1 DUF4956 domain-containing protein -
  H7677_RS04125 (DAT299_07680) mutX 839546..840028 (-) 483 WP_024381385.1 NUDIX hydrolase Machinery gene
  H7677_RS04130 (DAT299_07690) folE 840195..840758 (+) 564 WP_002938082.1 GTP cyclohydrolase I FolE -
  H7677_RS04135 (DAT299_07700) folP 840767..841579 (+) 813 WP_002938084.1 dihydropteroate synthase -
  H7677_RS04140 (DAT299_07710) folB 841572..841934 (+) 363 WP_105159819.1 dihydroneopterin aldolase -
  H7677_RS04145 (DAT299_07720) folK 841931..842419 (+) 489 WP_184494231.1 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase -
  H7677_RS04150 (DAT299_07730) - 842470..843780 (+) 1311 WP_184494233.1 GntP family permease -

Sequence

Protein


Download         Length: 160 a.a.        Molecular weight: 18540.89 Da        Isoelectric Point: 4.4960

>NTDB_id=70647 H7677_RS04125 WP_024381385.1 839546..840028(-) (mutX) [Streptococcus suis strain DAT299]
MTKKPVQLATICYIDNGKEFLLLHRNKKENDVHQGKWIGVGGKLEPGETPQACAIREVFEETGLTVTKHALKGVITFPDF
TPNTDWYTYVFKITGFEGSLIDCNEGDLEWVPYDQVLSKPTWEGDRHFQEWLLEDKPFFSACFRYDGDKLLDYSVDFYEE

Nucleotide


Download         Length: 483 bp        

>NTDB_id=70647 H7677_RS04125 WP_024381385.1 839546..840028(-) (mutX) [Streptococcus suis strain DAT299]
ATGACCAAGAAACCCGTCCAACTCGCTACGATTTGCTACATTGATAATGGCAAGGAATTTCTTCTCCTTCATCGAAACAA
GAAAGAAAACGATGTCCATCAAGGAAAATGGATTGGGGTCGGTGGCAAGCTGGAACCTGGCGAAACACCACAGGCTTGCG
CTATTCGTGAAGTCTTTGAGGAAACTGGGCTTACTGTAACAAAGCATGCTCTAAAAGGAGTGATAACCTTCCCAGACTTT
ACTCCAAACACAGACTGGTACACCTATGTCTTTAAGATAACTGGTTTTGAAGGAAGTCTTATTGACTGCAATGAAGGTGA
CTTAGAGTGGGTTCCCTATGACCAAGTCTTGTCCAAACCAACTTGGGAGGGCGACCGGCATTTTCAAGAATGGCTATTAG
AGGACAAACCATTTTTTTCCGCTTGCTTCCGCTATGATGGGGACAAACTGCTTGATTACAGTGTTGATTTTTATGAAGAA
TAA

Domains

Predicted by InterProScan.

NUDIX domain (NUDIX)

(8-132)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  mutX Streptococcus pneumoniae R6

81.046

95.625

0.775

Multiple sequence alignment