Detailed information    

insolico Bioinformatically predicted

Overview

Name   vicX   Type   Regulator
Locus tag   H7677_RS03160 Genome accession   NZ_AP023391
Coordinates   631486..632289 (+) Length   267 a.a.
NCBI ID   WP_002935843.1    Uniprot ID   -
Organism   Streptococcus suis strain DAT299     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context

Location: 626486..637289
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7677_RS03135 (DAT299_05660) - 626915..627613 (-) 699 WP_014637677.1 amino acid ABC transporter permease -
  H7677_RS03140 (DAT299_05670) - 627628..628467 (-) 840 WP_184494089.1 transporter substrate-binding domain-containing protein -
  H7677_RS03145 (DAT299_05680) - 628478..629239 (-) 762 WP_002935839.1 amino acid ABC transporter ATP-binding protein -
  H7677_RS03150 (DAT299_05690) yycF 629433..630137 (+) 705 WP_184494091.1 response regulator YycF -
  H7677_RS03155 (DAT299_05700) micB 630130..631479 (+) 1350 WP_024379730.1 cell wall metabolism sensor histidine kinase VicK Regulator
  H7677_RS03160 (DAT299_05710) vicX 631486..632289 (+) 804 WP_002935843.1 MBL fold metallo-hydrolase Regulator
  H7677_RS03165 (DAT299_05720) - 633152..634354 (-) 1203 WP_332068681.1 IS110 family transposase -
  H7677_RS03170 (DAT299_05730) - 634633..635166 (+) 534 WP_232088998.1 ATP-binding cassette domain-containing protein -
  H7677_RS03175 - 635142..636010 (+) 869 Protein_580 MobA/MobL family protein -
  H7677_RS03180 (DAT299_05760) - 636087..636728 (+) 642 WP_029749608.1 hypothetical protein -
  H7677_RS03185 (DAT299_05770) - 636962..637138 (+) 177 WP_415669135.1 hypothetical protein -

Sequence

Protein


Download         Length: 267 a.a.        Molecular weight: 29659.75 Da        Isoelectric Point: 5.7755

>NTDB_id=70638 H7677_RS03160 WP_002935843.1 631486..632289(+) (vicX) [Streptococcus suis strain DAT299]
MIGKGFNYSILASGSSGNCFYLETDKKKILVDAGLSGKKITSLLAEIDRKPEDIDAILVTHEHSDHIHGIGVLARKYGMD
IYANELTWQAMESKLGKIDVAQKHIFELGAMKTFGDLDIESFGVSHDAACPQFYRFMKDDKSFVMLTDTGYVSDRMVGIV
ENADAYLIESNHDIEILRSGSYSWNLKQRILSDKGHLCNEDGADAMIRSLGNRTKKIYLGHLSKENNIKELAHMTMVNQL
AQADLGVGVDFQVYDTSPDTATPLTKI

Nucleotide


Download         Length: 804 bp        

>NTDB_id=70638 H7677_RS03160 WP_002935843.1 631486..632289(+) (vicX) [Streptococcus suis strain DAT299]
ATGATCGGAAAAGGTTTTAATTATAGTATTTTAGCTTCGGGATCCAGCGGGAATTGTTTTTACCTAGAAACAGATAAAAA
GAAAATCTTAGTGGATGCTGGTTTATCTGGTAAAAAAATTACCAGTCTTTTGGCGGAAATTGATCGAAAGCCTGAGGATA
TTGATGCTATCCTGGTAACGCATGAACATAGCGATCACATCCATGGTATTGGTGTTTTAGCACGTAAGTATGGGATGGAC
ATTTATGCCAATGAATTGACCTGGCAGGCTATGGAGAGCAAATTGGGCAAGATTGATGTGGCTCAAAAACATATCTTCGA
ATTGGGTGCTATGAAGACTTTTGGTGACCTAGATATTGAGTCCTTTGGTGTCAGTCATGATGCGGCCTGTCCGCAATTTT
ACCGTTTTATGAAGGATGACAAATCCTTTGTTATGTTGACGGATACAGGCTATGTCAGTGACCGCATGGTTGGAATTGTA
GAAAATGCCGATGCTTATTTGATTGAATCCAACCATGATATTGAAATTTTGCGCTCGGGTTCTTATTCATGGAATTTGAA
GCAACGGATTCTATCCGATAAGGGCCATCTTTGTAATGAAGACGGAGCTGACGCCATGATTCGCTCGTTGGGAAATCGGA
CCAAAAAGATTTACCTAGGTCATTTGTCAAAGGAAAACAATATCAAGGAATTGGCTCACATGACCATGGTTAATCAGTTG
GCGCAGGCTGATTTAGGAGTTGGAGTGGATTTCCAAGTCTATGACACATCGCCAGATACAGCGACTCCCTTGACCAAGAT
TTGA

Domains

Predicted by InterProScan.

Metallo-beta-lactamase superfamily (Lactamase_B)

(15-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  vicX Streptococcus mutans UA159

77.154

100

0.772

Multiple sequence alignment