Detailed information    

insolico Bioinformatically predicted

Overview

Name   amiE   Type   Regulator
Locus tag   H7677_RS02400 Genome accession   NZ_AP023391
Coordinates   483502..484236 (+) Length   244 a.a.
NCBI ID   WP_002943067.1    Uniprot ID   A0A0H3MU26
Organism   Streptococcus suis strain DAT299     
Function   internalize XIP (predicted from homology)   
Competence regulation

Genomic Context

Location: 478502..489236
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7677_RS02375 (DAT299_04150) - 479002..479310 (-) 309 WP_002938710.1 DUF1827 family protein -
  H7677_RS02380 (DAT299_04160) - 479365..479826 (-) 462 WP_002938708.1 NUDIX hydrolase -
  H7677_RS02385 (DAT299_04170) clpE 480012..482240 (-) 2229 WP_184493940.1 ATP-dependent Clp protease ATP-binding subunit Regulator
  H7677_RS02390 (DAT299_04180) - 482464..482694 (+) 231 WP_002938704.1 DUF1797 family protein -
  H7677_RS02395 (DAT299_04190) - 482820..483509 (+) 690 WP_184493942.1 amino acid ABC transporter permease -
  H7677_RS02400 (DAT299_04200) amiE 483502..484236 (+) 735 WP_002943067.1 amino acid ABC transporter ATP-binding protein Regulator
  H7677_RS02405 (DAT299_04210) - 484366..485214 (+) 849 WP_023369567.1 bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase -
  H7677_RS02410 (DAT299_04220) - 486660..486959 (+) 300 WP_023369568.1 hypothetical protein -
  H7677_RS02415 (DAT299_04230) lepB 486949..487551 (+) 603 WP_023369570.1 signal peptidase I -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26881.11 Da        Isoelectric Point: 4.7252

>NTDB_id=70633 H7677_RS02400 WP_002943067.1 483502..484236(+) (amiE) [Streptococcus suis strain DAT299]
MSNAIISIKDLHKYFGKNEVLKGIDLDIQQGQVVVIIGPSGSGKSTFLRTMNLLEVPTKGTVTFEGVDITDKSNDIFKMR
EKMGMVFQQFNLFPNMTVLDNITLSPIKTKGIAKDEAEKKAKELLEKVGLPDKANAYPQSLSGGQQQRIAIARGLAMDPD
VLLFDEPTSALDPEMVGEVLAVMQDLAKSGMTMVIVTHEMGFAREVADRVIFMDGGVIVEDGTPEEVFEHTKEERTKDFL
SKVL

Nucleotide


Download         Length: 735 bp        

>NTDB_id=70633 H7677_RS02400 WP_002943067.1 483502..484236(+) (amiE) [Streptococcus suis strain DAT299]
ATGTCTAATGCGATTATTTCTATCAAGGATTTACATAAGTACTTCGGAAAGAATGAGGTTCTAAAAGGAATTGATTTAGA
TATTCAACAAGGTCAGGTGGTCGTTATTATCGGTCCATCAGGGTCAGGGAAATCGACTTTCTTACGTACAATGAACCTCT
TAGAAGTGCCAACCAAGGGAACTGTTACATTTGAAGGTGTTGATATTACTGACAAGTCAAATGATATTTTCAAGATGCGT
GAAAAGATGGGAATGGTTTTTCAACAGTTCAATCTTTTTCCAAATATGACGGTATTAGATAATATTACTTTATCACCTAT
TAAGACAAAGGGAATTGCAAAGGATGAGGCTGAGAAGAAGGCTAAGGAATTACTTGAAAAGGTAGGATTGCCGGATAAGG
CAAATGCCTATCCACAAAGCCTTTCAGGTGGTCAGCAACAACGGATCGCTATTGCACGTGGTCTGGCCATGGACCCAGAT
GTCCTACTTTTTGATGAACCGACCTCTGCACTAGACCCTGAAATGGTTGGTGAAGTTCTTGCTGTAATGCAGGATTTGGC
CAAGTCAGGGATGACCATGGTTATCGTGACTCATGAGATGGGATTTGCGCGTGAGGTAGCTGACAGGGTTATCTTTATGG
ATGGCGGTGTCATCGTGGAGGATGGAACGCCTGAAGAAGTCTTTGAACATACCAAGGAAGAACGGACCAAGGATTTCTTG
TCTAAGGTCTTGTAA

Domains

Predicted by InterProScan.

ABC transporter (ABC_tran)

(21-169)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0H3MU26

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  amiE Streptococcus salivarius strain HSISS4

34.496

100

0.365
  amiE Streptococcus thermophilus LMG 18311

34.496

100

0.365
  amiE Streptococcus thermophilus LMD-9

34.496

100

0.365

Multiple sequence alignment