Detailed information    

insolico Bioinformatically predicted

Overview

Name   recX   Type   Regulator
Locus tag   H7677_RS02155 Genome accession   NZ_AP023391
Coordinates   428330..429106 (+) Length   258 a.a.
NCBI ID   WP_184493904.1    Uniprot ID   -
Organism   Streptococcus suis strain DAT299     
Function   repressor of recA (predicted from homology)   
Homologous recombination

Genomic Context

Location: 423330..434106
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  H7677_RS10510 - 426452..426655 (-) 204 Protein_374 transposase -
  H7677_RS02150 (DAT299_03710) rlmD 426940..428292 (-) 1353 WP_012775501.1 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD -
  H7677_RS02155 (DAT299_03720) recX 428330..429106 (+) 777 WP_184493904.1 recombination regulator RecX Regulator
  H7677_RS02160 (DAT299_03730) - 429182..429715 (+) 534 WP_004194106.1 DUF402 domain-containing protein -
  H7677_RS02165 (DAT299_03740) - 429773..430090 (+) 318 WP_184493906.1 DUF960 domain-containing protein -
  H7677_RS02170 (DAT299_03750) - 430190..430921 (+) 732 WP_014735520.1 GntR family transcriptional regulator -
  H7677_RS02175 (DAT299_03760) - 431064..431774 (-) 711 WP_184493908.1 GntR family transcriptional regulator -
  H7677_RS02180 (DAT299_03770) - 431981..433753 (+) 1773 WP_184493910.1 glycoside hydrolase family 35 protein -

Sequence

Protein


Download         Length: 258 a.a.        Molecular weight: 30527.07 Da        Isoelectric Point: 9.2629

>NTDB_id=70631 H7677_RS02155 WP_184493904.1 428330..429106(+) (recX) [Streptococcus suis strain DAT299]
MRITKIEKKKRLYLLEVDGQDSLYITEDTIVRFMLSKGKEITEQEFRELRDFAQFSYGKNLALYYLSFKQRTQKEVSDYL
KKYEIEENNIVKIVTVLEEEKWLDDGNYVDSYVRQNALNGDKGPAMIRQKLMQKGIPKPLIDKRLAEEDFSELARKIGEK
LVGRYQRKLPLRALQDKVVQGLMGKGFSYETAKQSLGQLELVADEENEDDLIAKELDKQYRKYSRKYEGYELKQRLIQVL
ARKGYDFDRIQAVLRDYL

Nucleotide


Download         Length: 777 bp        

>NTDB_id=70631 H7677_RS02155 WP_184493904.1 428330..429106(+) (recX) [Streptococcus suis strain DAT299]
ATGAGAATTACAAAAATTGAAAAGAAGAAACGTCTTTATTTACTTGAAGTGGATGGTCAGGATAGTTTATATATTACGGA
AGACACAATTGTTCGCTTCATGCTTAGTAAGGGAAAGGAAATCACGGAGCAGGAGTTTCGTGAGCTTCGTGATTTTGCTC
AGTTTTCTTATGGGAAAAATCTAGCACTTTATTACCTTTCCTTCAAGCAACGTACCCAAAAAGAAGTTAGTGATTATCTA
AAAAAATATGAAATTGAAGAAAACAATATTGTTAAGATTGTGACGGTATTAGAAGAGGAAAAATGGCTGGACGATGGGAA
TTATGTTGATAGCTATGTTCGTCAGAATGCTCTAAATGGAGATAAGGGACCAGCTATGATTCGGCAGAAGTTGATGCAGA
AAGGAATTCCTAAACCGCTGATTGATAAAAGACTGGCTGAGGAAGATTTTTCAGAGCTTGCTAGGAAGATTGGGGAGAAA
TTGGTGGGTAGATACCAAAGAAAATTGCCTCTTCGAGCTTTGCAAGATAAAGTTGTACAGGGATTGATGGGTAAGGGGTT
TTCTTATGAGACGGCCAAACAAAGCCTGGGTCAGTTGGAACTTGTGGCTGATGAGGAAAATGAAGATGACTTAATCGCCA
AGGAATTGGATAAGCAGTATAGAAAATATAGTCGTAAATATGAAGGCTACGAATTGAAGCAAAGGTTGATACAGGTTTTG
GCTCGAAAGGGTTATGACTTTGATCGGATTCAGGCTGTCCTTCGTGATTATCTGTGA

Domains

Predicted by InterProScan.

RecX family (RecX_HTH2)

(80-198)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  recX Staphylococcus aureus strain ATCC 12600

35.955

100

0.372

Multiple sequence alignment