Detailed information NTG0706287

Bioinformatically predicted

Overview

• Name: hexB
• Type: Machinery gene
• Locus tag: G6L41_RS01630
• Genome accession: NZ_CP115924
• Coordinates: 345216..347036 (-)
• Length: 606 a.a.
• NCBI ID: WP_173992371.1
• Uniprot ID: -
• Organism: Agrobacterium tumefaciens strain K224
• Function: DNA mismatch repair (predicted from homology) Homologous recombination

Genomic Context

Location: 340216..352036

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
G6L41_RS01605 (G6L41_001605)	-	340995..341234 (+)	240	WP_019564234.1	DUF4170 domain-containing protein	-
G6L41_RS01610 (G6L41_001610)	waaA	341450..342772 (+)	1323	WP_004432170.1	lipid IV(A) 3-deoxy-D-manno-octulosonic acid transferase	-
G6L41_RS01615 (G6L41_001615)	-	342766..343503 (+)	738	WP_019564232.1	HAD family hydrolase	-
G6L41_RS01620 (G6L41_001620)	lpxK	343668..344714 (+)	1047	WP_173992370.1	tetraacyldisaccharide 4'-kinase	-
G6L41_RS01625 (G6L41_001625)	-	344845..345066 (-)	222	WP_003519053.1	DUF2093 domain-containing protein	-
G6L41_RS01630 (G6L41_001630)	hexB	345216..347036 (-)	1821	WP_173992371.1	DNA mismatch repair endonuclease MutL	Machinery gene
G6L41_RS01635 (G6L41_001635)	-	347444..349063 (+)	1620	WP_049790311.1	response regulator	-
G6L41_RS01640 (G6L41_001640)	-	349206..350558 (+)	1353	WP_003519050.1	putative bifunctional diguanylate cyclase/phosphodiesterase	-
G6L41_RS01645 (G6L41_001645)	-	350653..351540 (-)	888	WP_003519049.1	SMP-30/gluconolactonase/LRE family protein	-

Sequence

Protein

• Length: 606 a.a.
• Molecular weight: 65046.68 Da
• Isoelectric Point: 6.1689

>NTDB_id=706287 G6L41_RS01630 WP_173992371.1 345216..347036(-) (hexB) [Agrobacterium tumefaciens strain K224]
MAIKQLSETLINQIAAGEVIERPSSATKELVENAIDAGATRIEIATAGGGKGLVRITDNGSGMSPADLELAVRRHCTSKI
STTLDDIRTLGFRGEALPSIGSVAKLSITSRQHGAEQGSVISVTGGNVSEVRPAAANAGTIVEVRDLFFATPARLKFLKT
ERAEAAAITEVVKRMAIAFPHIRFVLSGTDRSTLEIPSTGDDHLARMAQILGAEFKDNAIEIDAGREDVTLSGFAGVPTF
NRGNSAHQYVFVNGRPVQDKLLLSAIRGAYAETVPHGRYPVAVLSLTLDPAFVDVNVHPAKSDVRFRDPGLVRGLIVGAI
RQALTRDGDRAATTGASQMMNAFRPGYSPSNLRPSAAATWSAAASPSRPLAISGNMQFAEAVQSRFSDITMPTARAEPSE
VYEASASPSLEPSQYPLGAARAQLHQNYIVAQTEDGLVIVDQHAAHERLVFEEMRNALHSRRPPSQVLLIPEIIDLPEED
CDRLMDHAAGFDALGLVIERFGPGAVAVRETPAMLGEVNVQGLVRQLADEIAEWDAASTLANKLEYVAATMACHGSVRSG
RRMRPEEMNALLRQMENTPGSGQCNHGRPTYIELKLSDIERLFGRS

Nucleotide

• Length: 1821 bp

>NTDB_id=706287 G6L41_RS01630 WP_173992371.1 345216..347036(-) (hexB) [Agrobacterium tumefaciens strain K224]
ATGGCCATCAAGCAGCTTTCAGAAACCCTCATCAACCAGATCGCCGCCGGCGAGGTCATCGAAAGACCCTCCAGCGCCAC
GAAGGAGCTGGTGGAAAACGCCATCGACGCGGGCGCAACGCGCATCGAAATCGCCACGGCGGGCGGCGGCAAGGGACTGG
TCCGCATTACCGATAACGGCTCCGGCATGTCGCCTGCCGATCTGGAGCTTGCGGTCCGACGCCATTGCACCTCGAAAATA
TCCACCACGCTTGACGATATCCGCACGCTTGGCTTTCGCGGCGAGGCCCTGCCCTCCATCGGCTCGGTTGCCAAGCTTTC
CATCACCAGCCGGCAACACGGCGCAGAGCAGGGTTCGGTGATCTCCGTCACCGGCGGCAACGTCTCCGAGGTCCGGCCCG
CCGCTGCCAATGCCGGCACCATCGTTGAGGTGCGCGACCTGTTTTTCGCGACGCCCGCACGGCTGAAATTCCTGAAGACG
GAGCGAGCGGAGGCAGCCGCCATCACCGAAGTCGTCAAGCGGATGGCAATTGCCTTTCCGCATATCCGCTTCGTGCTGTC
AGGCACCGACCGCTCCACGCTTGAAATCCCCTCCACCGGCGACGATCACCTTGCCCGCATGGCGCAGATTCTCGGTGCCG
AGTTCAAGGACAACGCCATCGAAATCGATGCCGGGCGCGAGGATGTAACGCTCTCCGGTTTTGCCGGCGTGCCGACCTTC
AACCGCGGCAACTCGGCGCATCAATATGTCTTCGTCAACGGTCGCCCGGTGCAGGACAAATTGCTGTTGTCCGCCATTCG
CGGTGCCTATGCCGAAACCGTGCCGCACGGGCGATATCCGGTCGCGGTGCTGTCCCTGACGCTCGATCCCGCCTTTGTCG
ACGTGAACGTGCATCCGGCGAAATCAGATGTGCGCTTCCGCGATCCCGGCCTCGTTCGCGGGCTGATCGTCGGTGCGATC
CGCCAGGCGCTGACTCGTGACGGTGACAGGGCGGCGACGACTGGTGCCAGCCAGATGATGAACGCCTTTCGCCCCGGCTA
CAGCCCGTCCAATCTCCGACCGTCTGCCGCTGCGACATGGTCCGCCGCGGCCTCGCCTTCCCGACCGCTTGCCATTTCCG
GGAACATGCAATTTGCCGAGGCCGTGCAATCGCGCTTTTCCGACATCACCATGCCGACCGCGCGGGCAGAACCCAGCGAG
GTTTACGAGGCCTCTGCAAGCCCGTCGCTGGAACCGTCACAATATCCGCTCGGCGCCGCGCGGGCGCAGTTGCACCAAAA
TTACATCGTCGCGCAGACGGAAGACGGCCTCGTCATCGTCGACCAGCATGCGGCGCATGAACGGCTCGTGTTTGAGGAAA
TGCGCAATGCGCTGCATTCCAGACGCCCGCCTTCACAGGTGCTGCTCATTCCTGAGATCATCGACCTTCCCGAAGAGGAT
TGCGACAGGCTGATGGACCATGCGGCTGGTTTCGATGCGCTGGGACTGGTCATCGAGCGTTTCGGGCCGGGGGCGGTCGC
GGTTCGCGAAACGCCGGCGATGCTTGGCGAGGTGAACGTGCAGGGGCTGGTGCGGCAGCTTGCCGACGAGATCGCTGAAT
GGGACGCTGCCTCCACGCTTGCCAACAAGCTGGAATATGTCGCCGCCACCATGGCTTGCCACGGCTCGGTGCGTTCAGGG
CGGCGCATGCGGCCGGAGGAGATGAACGCGCTTTTACGGCAGATGGAAAACACGCCGGGTTCAGGACAGTGCAATCACGG
TCGTCCGACCTATATTGAGCTAAAACTTTCCGATATAGAACGTCTCTTCGGCCGAAGCTGA

Domains

Predicted by InterProScan.

• MutL C terminal dimerisation domain (MutL_C) (416-562)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c_3) (24-117)

• DNA mismatch repair protein, C-terminal domain (DNA_mis_repair) (208-324)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
hexB	Streptococcus pneumoniae R6	34.326	100	0.361