Detailed information    

insolico Bioinformatically predicted

Overview

Name   kre   Type   Regulator
Locus tag   NLW79_RS07765 Genome accession   NZ_CP100651
Coordinates   1504159..1504623 (-) Length   154 a.a.
NCBI ID   WP_024121211.1    Uniprot ID   A0A9Q6A820
Organism   Bacillus halotolerans strain MEC_B334     
Function   regulation of regulators (predicted from homology)   
Competence regulation

Genomic Context

Location: 1499159..1509623
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLW79_RS07745 (NLW79_07745) kinA 1499623..1501455 (+) 1833 WP_095714840.1 sporulation histidine kinase KinA -
  NLW79_RS07750 (NLW79_07750) - 1501466..1502635 (-) 1170 WP_024121208.1 aminotransferase A -
  NLW79_RS07755 (NLW79_07755) - 1502837..1502998 (-) 162 WP_003238943.1 hypothetical protein -
  NLW79_RS07760 (NLW79_07760) cheV 1503206..1504117 (+) 912 WP_024121210.1 chemotaxis protein CheV -
  NLW79_RS07765 (NLW79_07765) kre 1504159..1504623 (-) 465 WP_024121211.1 YkyB family protein Regulator
  NLW79_RS07770 (NLW79_07770) - 1504749..1506041 (-) 1293 WP_024121212.1 MFS transporter -
  NLW79_RS07775 (NLW79_07775) - 1506117..1506611 (-) 495 WP_081638296.1 L,D-transpeptidase family protein -
  NLW79_RS07780 (NLW79_07780) - 1506669..1507529 (-) 861 WP_024121214.1 metallophosphoesterase -
  NLW79_RS07785 (NLW79_07785) fadH 1507674..1508438 (+) 765 WP_024121215.1 2,4-dienoyl-CoA reductase -

Sequence

Protein


Download         Length: 154 a.a.        Molecular weight: 17884.73 Da        Isoelectric Point: 10.4658

>NTDB_id=705998 NLW79_RS07765 WP_024121211.1 1504159..1504623(-) (kre) [Bacillus halotolerans strain MEC_B334]
MDDHAYSKDLQPTVENLSKAVYTVNRHAKTAPNPKYLYLLKKRALQKLVKEGKGKKIGLHFSKNPRFSQQQSDVLISIGD
YYFHMPPTKEDFEHLPHLGTLNQSYRNPKAQMSLTKAKHLLQKYVGMKEKPLVTNRQQPAYHKPVFKKLGESYF

Nucleotide


Download         Length: 465 bp        

>NTDB_id=705998 NLW79_RS07765 WP_024121211.1 1504159..1504623(-) (kre) [Bacillus halotolerans strain MEC_B334]
ATGGACGACCATGCATACTCGAAAGATCTGCAGCCAACCGTAGAAAATCTTTCAAAAGCAGTTTACACTGTGAACCGCCA
TGCAAAAACCGCCCCCAACCCTAAATACCTATATCTGCTGAAAAAACGGGCTTTGCAAAAGCTTGTCAAAGAAGGTAAAG
GAAAGAAAATAGGGCTTCATTTTTCAAAAAATCCAAGGTTCAGCCAACAGCAATCGGACGTGCTTATCTCAATCGGAGAC
TACTATTTTCACATGCCTCCAACTAAAGAAGACTTCGAACATCTTCCGCATTTAGGTACACTTAATCAGTCGTACCGAAA
TCCAAAAGCTCAAATGTCTTTAACAAAAGCAAAACACCTATTGCAAAAATACGTCGGCATGAAAGAAAAGCCGCTTGTGA
CGAATCGCCAGCAGCCCGCTTATCATAAGCCTGTCTTTAAGAAACTCGGCGAGAGTTATTTTTAA

Domains

Predicted by InterproScan.

YkyB-like protein (YkyB)

(14-128)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  kre Bacillus subtilis subsp. subtilis str. 168

98.052

100

0.981