Detailed information    

insolico Bioinformatically predicted

Overview


Name   coiA   Type   Machinery gene
Locus tag   NLW79_RS06265 Genome accession   NZ_CP100651
Coordinates   1231646..1232797 (+) Length   383 a.a.
NCBI ID   WP_106020543.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B334     
Function   homologous recombination; DNA uptake (predicted from homology)   
Homologous recombination DNA binding and uptake

Genomic Context


Location: 1226646..1237797
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLW79_RS06235 (NLW79_06235) - 1227317..1228534 (+) 1218 WP_254518294.1 MFS transporter -
  NLW79_RS06240 (NLW79_06240) - 1228701..1229279 (+) 579 WP_010333747.1 GNAT family N-acetyltransferase -
  NLW79_RS06245 (NLW79_06245) spx 1229459..1229854 (+) 396 WP_024120919.1 transcriptional regulator Spx -
  NLW79_RS06250 (NLW79_06250) - 1229897..1230553 (-) 657 WP_044156385.1 TerC family protein -
  NLW79_RS06255 (NLW79_06255) - 1230740..1230865 (+) 126 WP_120698858.1 hypothetical protein -
  NLW79_RS06260 (NLW79_06260) mecA 1230832..1231488 (+) 657 WP_024120921.1 adaptor protein MecA Regulator
  NLW79_RS06265 (NLW79_06265) coiA 1231646..1232797 (+) 1152 WP_106020543.1 competence protein CoiA family protein Machinery gene
  NLW79_RS06270 (NLW79_06270) pepF 1233027..1234856 (+) 1830 WP_174754411.1 oligoendopeptidase F -
  NLW79_RS06275 (NLW79_06275) - 1234892..1235059 (-) 168 WP_024120925.1 hypothetical protein -
  NLW79_RS06280 (NLW79_06280) spxH 1235373..1236272 (-) 900 WP_024120926.1 protease adaptor protein SpxH -
  NLW79_RS06285 (NLW79_06285) - 1236269..1236667 (-) 399 WP_010333756.1 thiol management oxidoreductase -
  NLW79_RS06290 (NLW79_06290) - 1236924..1237655 (-) 732 WP_254518157.1 lytic transglycosylase domain-containing protein -

Sequence


Protein


Download         Length: 383 a.a.        Molecular weight: 44708.84 Da        Isoelectric Point: 9.8371

>NTDB_id=705994 NLW79_RS06265 WP_106020543.1 1231646..1232797(+) (coiA) [Bacillus halotolerans strain MEC_B334]
MFSAVTEDGQVFHLIGRQRREQLKQTRFFCPVCAEELDVKLGSQKAPHFAHKQNKSCTIDIEPESAYHLEGKRQLYVWLK
TQKASPLLEPYVKEIKQRPDILAKVKGDTLAVEYQCATLAPDVFQKRTAGFKQAGLIPQWILGGSRLKRTSSSFYQLSAF
HWQFINASPNSDLLCYCPETHSFLRLSRMIPFYTTHFYCSVQTIPIRQAAAEDLFCTEPDSSFKHSDWTGAILRFRRKTH
RFLSKDMNRIRLLFYEKRQTPLSFLPTEVFVPVKKGAVFKSPVFVWQGYLYLFITDLGYKHAPIRFSAVLQHCKIHIHKK
NILLRGVYRDQDFIEAVKQYIEFLCKKGFLRETQKEVYVLNQPAKRSQSLQDLIEKDRSCFIE

Nucleotide


Download         Length: 1152 bp        

>NTDB_id=705994 NLW79_RS06265 WP_106020543.1 1231646..1232797(+) (coiA) [Bacillus halotolerans strain MEC_B334]
TTGTTTAGTGCTGTGACAGAAGACGGCCAAGTGTTTCACCTTATAGGCAGGCAGAGGAGAGAACAATTAAAGCAGACCAG
ATTTTTCTGCCCGGTGTGTGCAGAGGAGCTCGATGTGAAGCTAGGGTCTCAGAAAGCGCCGCATTTTGCCCATAAACAGA
ACAAGTCTTGCACGATAGACATAGAACCTGAGAGCGCCTATCACTTAGAAGGAAAACGGCAGCTTTATGTATGGCTGAAA
ACGCAAAAGGCTTCCCCGCTCTTAGAGCCGTACGTGAAAGAGATTAAACAAAGGCCCGACATCTTGGCAAAAGTAAAGGG
GGATACGCTTGCAGTTGAATACCAATGCGCGACTCTCGCTCCAGATGTCTTTCAAAAAAGAACAGCCGGTTTCAAACAAG
CAGGACTGATACCGCAGTGGATTCTTGGAGGCAGCCGCTTAAAACGGACATCATCATCCTTTTACCAGCTGTCCGCTTTC
CATTGGCAGTTTATCAATGCCAGTCCGAACAGTGATCTGTTATGTTACTGCCCCGAAACACATTCTTTCCTGAGGCTCAG
CCGCATGATCCCGTTTTACACAACCCATTTTTACTGCTCCGTCCAAACGATTCCAATCCGCCAGGCAGCGGCTGAAGATT
TATTTTGCACGGAACCAGATTCTTCGTTTAAGCACTCAGATTGGACAGGAGCCATTCTCCGTTTTCGCCGCAAAACTCAT
CGCTTTCTCTCTAAAGATATGAATCGGATCAGGCTTCTGTTTTATGAAAAACGGCAAACACCTCTCTCTTTTCTTCCGAC
AGAGGTGTTTGTTCCTGTAAAGAAAGGAGCTGTTTTTAAGAGCCCCGTTTTTGTATGGCAGGGCTATCTTTATCTGTTTA
TTACGGATCTTGGATATAAACATGCGCCCATTCGTTTTTCAGCCGTTTTGCAGCACTGCAAAATACACATTCATAAAAAG
AACATTTTGCTAAGAGGCGTATACAGGGATCAGGATTTCATTGAGGCGGTTAAACAGTACATTGAGTTTTTGTGCAAGAA
GGGATTTTTGAGGGAGACTCAGAAAGAAGTATATGTGCTGAATCAGCCCGCAAAGCGCAGCCAATCATTACAGGATCTCA
TTGAAAAAGACAGAAGCTGTTTTATCGAATGA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  coiA Bacillus subtilis subsp. subtilis str. 168

75.603

97.389

0.736