Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   NLW79_RS06150 Genome accession   NZ_CP100651
Coordinates   1209361..1209552 (+) Length   63 a.a.
NCBI ID   WP_003224559.1    Uniprot ID   G4NWD2
Organism   Bacillus halotolerans strain MEC_B334     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1204361..1214552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLW79_RS06120 (NLW79_06120) argF 1205192..1206148 (+) 957 WP_024120900.1 ornithine carbamoyltransferase -
  NLW79_RS06125 (NLW79_06125) - 1206250..1206429 (+) 180 WP_003239319.1 YjzC family protein -
  NLW79_RS06130 (NLW79_06130) - 1206475..1206660 (-) 186 WP_010333727.1 YjzD family protein -
  NLW79_RS06135 (NLW79_06135) - 1206919..1207656 (+) 738 WP_095713629.1 hypothetical protein -
  NLW79_RS06140 (NLW79_06140) - 1207739..1208302 (+) 564 WP_106020550.1 hypothetical protein -
  NLW79_RS06145 (NLW79_06145) med 1208393..1209346 (+) 954 WP_024120903.1 BMP family ABC transporter substrate-binding protein Regulator
  NLW79_RS06150 (NLW79_06150) comZ 1209361..1209552 (+) 192 WP_003224559.1 ComG operon transcriptional repressor ComZ Regulator
  NLW79_RS06155 (NLW79_06155) - 1209582..1209812 (-) 231 WP_081638273.1 hypothetical protein -
  NLW79_RS06160 (NLW79_06160) fabH 1209978..1210916 (+) 939 WP_106020549.1 beta-ketoacyl-ACP synthase III -
  NLW79_RS06165 (NLW79_06165) fabF 1210940..1212178 (+) 1239 WP_024120905.1 beta-ketoacyl-ACP synthase II -
  NLW79_RS06170 (NLW79_06170) - 1212258..1213043 (+) 786 WP_106020548.1 DUF2268 domain-containing protein -
  NLW79_RS06175 (NLW79_06175) appD 1213234..1214220 (+) 987 WP_106020547.1 oligopeptide ABC transporter ATP-binding protein AppD -

Sequence

Protein


Download         Length: 63 a.a.        Molecular weight: 7214.27 Da        Isoelectric Point: 4.2564

>NTDB_id=705990 NLW79_RS06150 WP_003224559.1 1209361..1209552(+) (comZ) [Bacillus halotolerans strain MEC_B334]
MQHEKSLEFLQIAMKYLPEAKEQLEKSGIELSMEAIQPFMNLFTTVMAEAYELGKSDAKSETE

Nucleotide


Download         Length: 192 bp        

>NTDB_id=705990 NLW79_RS06150 WP_003224559.1 1209361..1209552(+) (comZ) [Bacillus halotolerans strain MEC_B334]
ATGCAGCACGAAAAATCACTTGAGTTTCTGCAAATAGCAATGAAATATCTGCCTGAAGCGAAAGAGCAGCTTGAAAAATC
AGGAATAGAGCTGTCGATGGAGGCCATTCAGCCGTTTATGAATTTATTTACAACGGTAATGGCGGAAGCCTATGAGCTGG
GTAAATCCGACGCGAAATCTGAAACCGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(4-58)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB G4NWD2

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

100

100

1