Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   FGCSD_RS09085 Genome accession   NZ_AP018726
Coordinates   1829057..1829782 (-) Length   241 a.a.
NCBI ID   WP_129556174.1    Uniprot ID   A0A9X7XAP9
Organism   Streptococcus dysgalactiae strain Kdys0611     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1824057..1834782
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  FGCSD_RS09055 (FGCSD_1761) nusA 1824251..1825408 (-) 1158 WP_003052330.1 transcription termination factor NusA -
  FGCSD_RS09060 (FGCSD_1762) rimP 1825551..1826000 (-) 450 WP_231112742.1 ribosome maturation factor RimP -
  FGCSD_RS09070 (FGCSD_1763) trmB 1826529..1827164 (-) 636 WP_129556172.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  FGCSD_RS09075 (FGCSD_1764) - 1827164..1827955 (-) 792 WP_003052472.1 phosphotransferase family protein -
  FGCSD_RS09080 (FGCSD_1765) - 1828020..1829054 (-) 1035 WP_129556173.1 ABC transporter permease -
  FGCSD_RS09085 (FGCSD_1766) pptA 1829057..1829782 (-) 726 WP_129556174.1 ABC transporter ATP-binding protein Regulator
  FGCSD_RS09090 (FGCSD_1767) - 1829854..1830273 (+) 420 WP_012767493.1 HIT family protein -
  FGCSD_RS09095 (FGCSD_1768) - 1830270..1830599 (+) 330 WP_129556175.1 chemotaxis protein -
  FGCSD_RS09100 (FGCSD_1769) - 1830760..1832028 (-) 1269 WP_129556176.1 LCP family protein -
  FGCSD_RS09105 (FGCSD_1770) - 1832040..1832561 (-) 522 WP_129556177.1 GNAT family N-acetyltransferase -
  FGCSD_RS09110 (FGCSD_1771) tsaE 1832554..1832997 (-) 444 WP_115247110.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  FGCSD_RS09115 (FGCSD_1772) - 1833178..1834638 (-) 1461 WP_129556178.1 NCS2 family permease -

Sequence

Protein


Download         Length: 241 a.a.        Molecular weight: 26402.62 Da        Isoelectric Point: 4.6450

>NTDB_id=70599 FGCSD_RS09085 WP_129556174.1 1829057..1829782(-) (pptA) [Streptococcus dysgalactiae strain Kdys0611]
MLNIENLTGGYLNIPVLKEVSFSVGNGELVGLIGLNGAGKSTTINEIIGFLKPYQGEISIDGLTLAADPATYRKKIGFIP
ETPSLYEELTLAEHINTVAMAYDIDVELAQKRAEPFLKMFRLADKLDWFPVHFSKGMKQKVMIICAFVIDPSLFILDEPF
LGLDPLAISDLIQTLEVEKAKGKSILMSTHVLDSAEKMCDRFVILHHGQVRAQGTLADLQDAFGDGSASLNDIYLALTKE
G

Nucleotide


Download         Length: 726 bp        

>NTDB_id=70599 FGCSD_RS09085 WP_129556174.1 1829057..1829782(-) (pptA) [Streptococcus dysgalactiae strain Kdys0611]
ATGTTAAACATTGAAAATCTAACGGGGGGTTACCTCAATATTCCCGTTTTAAAAGAGGTCTCATTTTCTGTTGGCAATGG
TGAATTAGTTGGGTTGATAGGCTTAAATGGAGCTGGAAAATCAACAACTATCAATGAAATTATTGGTTTTTTAAAACCTT
ATCAGGGAGAAATCTCGATTGATGGACTAACCTTGGCTGCAGATCCAGCTACCTATCGTAAGAAAATTGGATTTATCCCA
GAGACACCTAGCCTCTATGAAGAATTAACTTTGGCAGAGCATATTAATACTGTGGCTATGGCCTATGATATTGATGTGGA
ATTGGCACAAAAACGAGCAGAACCGTTTTTAAAGATGTTCCGCTTAGCTGATAAATTAGATTGGTTTCCTGTTCATTTTT
CAAAAGGCATGAAGCAAAAAGTCATGATTATCTGTGCTTTTGTGATTGATCCAAGTCTGTTTATCCTTGACGAGCCATTT
TTAGGATTAGACCCGTTGGCTATCTCAGACTTGATTCAGACTTTGGAGGTTGAAAAAGCCAAAGGCAAATCGATTTTAAT
GAGTACTCATGTGCTTGACTCTGCTGAGAAAATGTGTGATCGTTTTGTCATTCTGCATCATGGTCAAGTACGGGCTCAGG
GAACGCTTGCTGACTTACAGGATGCCTTTGGTGATGGTTCTGCTAGCCTTAACGATATTTACCTGGCATTGACAAAAGAG
GGCTAA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.732

99.17

0.751
  pptA Streptococcus thermophilus LMD-9

74.895

99.17

0.743

Multiple sequence alignment