Detailed information    

insolico Bioinformatically predicted

Overview

Name   braR   Type   Regulator
Locus tag   OSK17_RS18905 Genome accession   NZ_CP115738
Coordinates   3591916..3592629 (-) Length   237 a.a.
NCBI ID   WP_003228163.1    Uniprot ID   -
Organism   Bacillus subtilis strain W7     
Function   promote expression of competence genes (predicted from homology)   
Competence regulation

Genomic Context

Location: 3586916..3597629
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OSK17_RS18885 (OSK17_18885) ghrB 3587061..3588038 (+) 978 WP_072173470.1 2-hydroxyacid dehydrogenase -
  OSK17_RS18890 (OSK17_18890) psdB 3588075..3590015 (-) 1941 WP_041850493.1 lantibiotic ABC transporter permease PsdB -
  OSK17_RS18895 (OSK17_18895) psdA 3589990..3590769 (-) 780 WP_003228167.1 lantibiotic ABC transporter ATP-binding protein PsdA -
  OSK17_RS18900 (OSK17_18900) psdS 3590852..3591922 (-) 1071 WP_041850492.1 two-component sensor histidine kinase PsdS -
  OSK17_RS18905 (OSK17_18905) braR 3591916..3592629 (-) 714 WP_003228163.1 two-component system response regulator PsdR Regulator
  OSK17_RS18910 (OSK17_18910) - 3592976..3593746 (-) 771 WP_043940202.1 DUF6973 domain-containing protein -
  OSK17_RS18915 (OSK17_18915) - 3593883..3594083 (+) 201 WP_373569463.1 hypothetical protein -
  OSK17_RS18920 (OSK17_18920) yvcN 3594147..3594911 (-) 765 WP_080332556.1 arylamine N-acetyltransferase family protein -
  OSK17_RS18925 (OSK17_18925) crh 3594912..3595169 (-) 258 WP_003219835.1 HPr family phosphocarrier protein -
  OSK17_RS18930 (OSK17_18930) whiA 3595193..3596143 (-) 951 WP_003228147.1 DNA-binding protein WhiA -
  OSK17_RS18935 (OSK17_18935) mgfK 3596166..3597119 (-) 954 WP_003244450.1 gluconeogenesis morphogenetic factor -

Sequence

Protein


Download         Length: 237 a.a.        Molecular weight: 27541.46 Da        Isoelectric Point: 4.6774

>NTDB_id=705980 OSK17_RS18905 WP_003228163.1 3591916..3592629(-) (braR) [Bacillus subtilis strain W7]
MYRILLVEDDERIASLLGGHLQKYGYEVKIAEQLNDIKLEFAEMKPDLVLLDINLPFFDGFYWCRQIRTISNAPIIFISA
RTDELNQVMAIENGGDDYITKPFHLEVVMAKIKSVLRRTYGEYSPSLPQESRIVELGGLTIYPDQNEAEWNSVRILFSQK
EFQLLSIFVREHKKIVSRDELLEALWDDVDFVDDNTLTVNVNRLRRKLENAGLKDCISTIRGQGYQFQVNRKDEAEC

Nucleotide


Download         Length: 714 bp        

>NTDB_id=705980 OSK17_RS18905 WP_003228163.1 3591916..3592629(-) (braR) [Bacillus subtilis strain W7]
GTGTATCGGATTTTGCTTGTGGAAGATGATGAGCGGATTGCTTCTTTGCTGGGCGGTCATCTTCAAAAATACGGATATGA
AGTGAAAATTGCTGAACAGCTGAATGATATAAAATTGGAATTTGCAGAAATGAAGCCTGATCTTGTGCTGCTTGATATCA
ACCTGCCTTTTTTTGACGGGTTTTATTGGTGCAGGCAAATCCGTACCATTTCCAATGCGCCGATTATCTTTATATCGGCA
CGGACCGATGAGCTGAATCAGGTAATGGCGATTGAAAATGGCGGCGATGATTATATCACAAAGCCGTTCCATCTAGAGGT
AGTGATGGCCAAAATCAAAAGCGTCCTGCGCCGCACATATGGTGAATACTCGCCCTCTTTGCCGCAGGAATCAAGAATAG
TGGAGCTTGGCGGGCTAACGATTTATCCTGATCAAAATGAAGCGGAGTGGAACAGCGTCCGGATTTTGTTTTCCCAAAAA
GAATTCCAGCTTCTCTCGATTTTTGTGAGGGAGCATAAAAAAATTGTCTCTCGTGATGAACTATTGGAGGCGTTATGGGA
TGACGTTGATTTTGTCGATGACAATACGTTAACGGTCAATGTCAACCGGCTGCGGAGAAAACTGGAGAATGCAGGACTGA
AAGATTGCATTTCCACAATCAGAGGACAAGGCTATCAATTTCAAGTCAATCGGAAGGATGAAGCGGAATGTTAA

Domains

Predicted by InterProScan.

Transcriptional regulatory protein, C terminal (Trans_reg_C)

(155-227)

Response regulator receiver domain (Response_reg)

(4-112)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  braR Staphylococcus aureus N315

45.536

94.515

0.43