Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   NLW79_RS02195 Genome accession   NZ_CP100651
Coordinates   433783..434733 (+) Length   316 a.a.
NCBI ID   WP_010333025.1    Uniprot ID   -
Organism   Bacillus halotolerans strain MEC_B334     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 428783..439733
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLW79_RS02170 (NLW79_02170) rapC 430168..431316 (+) 1149 WP_024120212.1 response regulator aspartate phosphatase RapC Regulator
  NLW79_RS02175 (NLW79_02175) phrC 431300..431422 (+) 123 WP_024120213.1 PhrC/PhrF family phosphatase-inhibitory pheromone Regulator
  NLW79_RS02180 (NLW79_02180) - 431527..431619 (-) 93 WP_024120214.1 YjcZ family sporulation protein -
  NLW79_RS02185 (NLW79_02185) - 431772..431882 (-) 111 WP_024120215.1 YjcZ family sporulation protein -
  NLW79_RS02190 (NLW79_02190) - 432033..433397 (-) 1365 WP_095714086.1 aspartate kinase -
  NLW79_RS02195 (NLW79_02195) ceuB 433783..434733 (+) 951 WP_010333025.1 petrobactin ABC transporter permease YclN Machinery gene
  NLW79_RS02200 (NLW79_02200) yclO 434726..435673 (+) 948 WP_024120217.1 petrobactin ABC transporter permease YclO -
  NLW79_RS02205 (NLW79_02205) yclP 435667..436425 (+) 759 WP_095714087.1 petrobactin ABC transporter ATP-binding protein YclP -
  NLW79_RS02210 (NLW79_02210) - 436447..437400 (+) 954 WP_254518040.1 siderophore ABC transporter substrate-binding protein -
  NLW79_RS02215 (NLW79_02215) - 437449..438867 (-) 1419 WP_095714088.1 MDR family MFS transporter -

Sequence

Protein


Download         Length: 316 a.a.        Molecular weight: 35011.45 Da        Isoelectric Point: 9.8262

>NTDB_id=705979 NLW79_RS02195 WP_010333025.1 433783..434733(+) (ceuB) [Bacillus halotolerans strain MEC_B334]
MKLRYLFFLLIILAVTSVFIGVEDLSPLDLFDLSKEEASTLFASRLPRLISILIAGMSMSICGLIMQQITRNKFVSPTTA
GTMDWARLGILISLLLFTSASPLMKMLIAFVFALVGNFLFMKILERIKFNDTIFIPLVGLMLGNIVSSIATFIAYKYDLI
QNVSSWLQGDFSLVVKGRYELLYLSIPLVIIAYVYADKFTVAGMGESFSVNLGLKYKRVVNIGLIIVSLITSLVILTVGM
LPFLGLIIPNIVSIYRGDNLKNSLPHTALLGAVFVLFCDILGRVIIFPYEISIGLMVGIIGSGIFLFMLLRRKAYA

Nucleotide


Download         Length: 951 bp        

>NTDB_id=705979 NLW79_RS02195 WP_010333025.1 433783..434733(+) (ceuB) [Bacillus halotolerans strain MEC_B334]
ATGAAGCTACGTTACTTATTTTTTCTACTTATCATATTAGCAGTCACTTCTGTATTTATCGGCGTAGAAGATCTGTCGCC
GCTTGATCTCTTTGATTTAAGCAAAGAAGAGGCGTCAACGCTCTTTGCCAGCCGTTTGCCGCGGCTGATCAGCATTCTAA
TCGCGGGCATGAGCATGAGCATCTGCGGGCTGATTATGCAGCAGATCACCAGAAACAAATTCGTGTCACCGACAACGGCC
GGCACGATGGACTGGGCGAGGCTGGGAATCTTAATATCCTTGCTTCTGTTTACATCGGCAAGTCCTTTAATGAAAATGCT
GATTGCTTTTGTCTTTGCTTTAGTCGGCAATTTTCTGTTTATGAAAATTCTTGAAAGAATCAAGTTTAACGACACCATCT
TTATTCCGCTAGTCGGTTTAATGCTCGGGAATATCGTCAGCTCAATCGCGACGTTTATCGCGTATAAATATGACCTGATC
CAGAACGTGTCATCATGGCTTCAGGGGGATTTCTCCTTAGTTGTGAAAGGGAGATACGAGCTTCTTTATCTGAGTATTCC
GCTTGTCATCATTGCCTATGTTTATGCGGATAAATTTACAGTGGCGGGTATGGGAGAAAGCTTTTCTGTCAACCTCGGCC
TCAAGTATAAACGGGTTGTGAACATCGGGCTCATTATCGTATCCCTGATTACGTCACTTGTCATTTTGACTGTCGGTATG
CTTCCGTTTCTCGGTTTAATCATCCCGAACATTGTATCGATCTACAGAGGAGACAACCTGAAAAACAGCCTGCCGCACAC
TGCGCTGCTGGGAGCGGTTTTTGTTCTGTTTTGCGATATATTGGGCAGAGTCATTATCTTCCCATATGAAATCTCGATTG
GTCTGATGGTCGGAATCATCGGCAGCGGCATTTTCCTGTTTATGCTGTTAAGGAGAAAAGCGTATGCGTAA

Domains

Predicted by InterproScan.

FecCD transport family (FecCD)

(9-311)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

53.797

100

0.538