Detailed information
Bioinformatically predicted
Overview
| Name | ctsG | Type | Machinery gene |
| Locus tag | NL684_RS07580 | Genome accession | NZ_CP100645 |
| Coordinates | 1469101..1469211 (+) | Length | 36 a.a. |
| NCBI ID | WP_081305842.1 | Uniprot ID | - |
| Organism | Campylobacter fetus subsp. fetus strain M20-04752-1B | ||
| Function | type II secretion system/type IV pilin; DNA uptake (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1464101..1474211
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| NL684_RS07555 (NL684_07525) | - | 1464636..1465568 (+) | 933 | WP_002850456.1 | aspartate carbamoyltransferase catalytic subunit | - |
| NL684_RS07560 (NL684_07530) | - | 1465572..1466852 (+) | 1281 | WP_038454053.1 | dihydroorotase family protein | - |
| NL684_RS07565 (NL684_07535) | - | 1466967..1467464 (-) | 498 | WP_065844879.1 | type II secretion system protein | - |
| NL684_RS07570 (NL684_07540) | - | 1467892..1468407 (+) | 516 | WP_166428271.1 | type II secretion system protein | - |
| NL684_RS07575 (NL684_07545) | - | 1468602..1469078 (+) | 477 | WP_065844751.1 | hypothetical protein | - |
| NL684_RS07580 (NL684_07550) | ctsG | 1469101..1469211 (+) | 111 | WP_081305842.1 | prepilin-type N-terminal cleavage/methylation domain-containing protein | Machinery gene |
| NL684_RS07585 (NL684_07555) | - | 1469294..1469626 (+) | 333 | WP_167497345.1 | hypothetical protein | - |
| NL684_RS07590 (NL684_07560) | mnmA | 1469767..1470783 (-) | 1017 | WP_002850468.1 | tRNA 2-thiouridine(34) synthase MnmA | - |
| NL684_RS07595 (NL684_07565) | - | 1471056..1472009 (+) | 954 | WP_065844752.1 | formate dehydrogenase subunit gamma | - |
| NL684_RS07600 (NL684_07570) | - | 1472071..1472583 (-) | 513 | WP_011732226.1 | hypothetical protein | - |
| NL684_RS07605 (NL684_07575) | - | 1472640..1473167 (-) | 528 | WP_011732227.1 | TIGR00730 family Rossman fold protein | - |
Sequence
Protein
Download Length: 36 a.a. Molecular weight: 3953.10 Da Isoelectric Point: 10.9761
>NTDB_id=705928 NL684_RS07580 WP_081305842.1 1469101..1469211(+) (ctsG) [Campylobacter fetus subsp. fetus strain M20-04752-1B]
MKKAFTIIEIVMVMIILGVLASLAIPKLVMPKSPKQ
MKKAFTIIEIVMVMIILGVLASLAIPKLVMPKSPKQ
Nucleotide
Download Length: 111 bp
>NTDB_id=705928 NL684_RS07580 WP_081305842.1 1469101..1469211(+) (ctsG) [Campylobacter fetus subsp. fetus strain M20-04752-1B]
ATGAAAAAAGCTTTTACGATTATAGAAATTGTGATGGTGATGATCATCTTAGGCGTTTTAGCGTCTTTGGCGATACCTAA
ACTAGTAATGCCAAAGTCGCCAAAGCAGTAA
ATGAAAAAAGCTTTTACGATTATAGAAATTGTGATGGTGATGATCATCTTAGGCGTTTTAGCGTCTTTGGCGATACCTAA
ACTAGTAATGCCAAAGTCGCCAAAGCAGTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ctsG | Campylobacter jejuni subsp. jejuni 81-176 |
56.25 |
88.889 |
0.5 |
| pilA | Vibrio campbellii strain DS40M4 |
41.463 |
100 |
0.472 |
| pilA/pilA1 | Synechocystis sp. PCC 6803 |
53.846 |
72.222 |
0.389 |
| pilA | Vibrio cholerae O1 biovar El Tor strain E7946 |
46.429 |
77.778 |
0.361 |
| pilA | Vibrio cholerae strain A1552 |
46.429 |
77.778 |
0.361 |
| pilA | Vibrio cholerae C6706 |
46.429 |
77.778 |
0.361 |
| comGC/cglC | Streptococcus pneumoniae TIGR4 |
40.625 |
88.889 |
0.361 |
| comYC | Streptococcus gordonii str. Challis substr. CH1 |
40.625 |
88.889 |
0.361 |
| pilA | Ralstonia pseudosolanacearum GMI1000 |
50 |
72.222 |
0.361 |
| pilA | Vibrio parahaemolyticus RIMD 2210633 |
52 |
69.444 |
0.361 |
| comGC/cglC | Streptococcus pneumoniae Rx1 |
40.625 |
88.889 |
0.361 |
| comGC/cglC | Streptococcus pneumoniae D39 |
40.625 |
88.889 |
0.361 |
| comGC/cglC | Streptococcus pneumoniae R6 |
40.625 |
88.889 |
0.361 |