Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   OK783_RS10860 Genome accession   NZ_CP115654
Coordinates   2068479..2069447 (-) Length   322 a.a.
NCBI ID   WP_010951404.1    Uniprot ID   Q5F545
Organism   Neisseria gonorrhoeae strain FA1090 N-1-60     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2063479..2074447
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  OK783_RS10835 (OK783_10835) - 2064019..2065326 (-) 1308 WP_010951402.1 YadA-like family protein -
  OK783_RS11605 - 2065566..2065967 (+) 402 WP_416349182.1 transposase -
  OK783_RS10845 (OK783_10845) - 2066002..2066760 (-) 759 WP_003687045.1 ABC transporter ATP-binding protein -
  OK783_RS10850 (OK783_10850) - 2066844..2067470 (-) 627 WP_003687047.1 FmdE family protein -
  OK783_RS10855 (OK783_10855) - 2067515..2068489 (-) 975 WP_010951403.1 iron chelate uptake ABC transporter family permease subunit -
  OK783_RS10860 (OK783_10860) ceuB 2068479..2069447 (-) 969 WP_010951404.1 ABC transporter permease Machinery gene
  OK783_RS10865 (OK783_10865) - 2069466..2069657 (-) 192 WP_162098494.1 hypothetical protein -
  OK783_RS10870 (OK783_10870) - 2069675..2070646 (-) 972 WP_010951405.1 siderophore ABC transporter substrate-binding protein -
  OK783_RS10875 (OK783_10875) fetA 2070798..2072939 (-) 2142 WP_010951406.1 TonB-dependent siderophore receptor FetA/FrpB -
  OK783_RS10880 (OK783_10880) - 2073443..2073733 (+) 291 WP_003687059.1 co-chaperone GroES -

Sequence

Protein


Download         Length: 322 a.a.        Molecular weight: 34458.78 Da        Isoelectric Point: 9.9393

>NTDB_id=705846 OK783_RS10860 WP_010951404.1 2068479..2069447(-) (ceuB) [Neisseria gonorrhoeae strain FA1090 N-1-60]
MTAKPFSLNLANLLLPAVLFAVSLSVGIADFRWSDVFSLSDSQQVMFISRLPRTFAIVLTGASMAVAGMIMQILMRNRFV
EPSMAGAGQSAALGLLLMSLLLPAAPLPVKMSVAAVAALIGMLVFMLLIRRLPPTAQLMVPLVGIIFGGVVEAVATFVAY
EFEMLQMLGVWQQGDFSSVLLGRYELLWITGGLAVFAYLIADRLTILGLGETVSVNLGLNRTAVLWSGLIIVALITSLVI
VTVGNIPFIGLVVPNIVSRLMGDRLRQSLPAVALLGASLVLLCDIIGRMIVFPFEIPVSTVFGVLGTALFLWLLLRKPAY
AV

Nucleotide


Download         Length: 969 bp        

>NTDB_id=705846 OK783_RS10860 WP_010951404.1 2068479..2069447(-) (ceuB) [Neisseria gonorrhoeae strain FA1090 N-1-60]
ATGACTGCCAAACCTTTTTCCCTCAACCTGGCCAACCTCCTGCTGCCGGCGGTATTGTTTGCCGTCAGCCTGTCGGTCGG
CATTGCCGATTTCCGCTGGTCGGATGTGTTTTCGCTGTCCGACAGCCAGCAAGTGATGTTCATCAGCCGCCTGCCGCGCA
CGTTTGCGATTGTGTTGACGGGCGCGTCGATGGCGGTGGCGGGGATGATTATGCAGATTCTGATGCGCAACCGTTTTGTC
GAGCCTTCTATGGCGGGTGCGGGCCAAAGTGCGGCTTTGGGTTTGCTTCTGATGTCCCTGCTGCTGCCTGCCGCGCCGCT
GCCGGTCAAAATGTCGGTTGCCGCCGTTGCCGCGCTGATCGGGATGTTGGTCTTTATGCTGCTGATCCGCCGCCTGCCGC
CGACGGCGCAGCTGATGGTGCCGCTGGTGGGGATTATTTTCGGCGGCGTGGTTGAGGCGGTGGCGACGTTTGTCGCGTAT
GAGTTTGAGATGCTGCAAATGTTGGGCGTGTGGCAGCAGGGCGACTTTTCAAGCGTGCTGCTGGGGCGGTACGAGCTGCT
TTGGATTACGGGCGGTTTGGCGGTGTTTGCCTACCTGATTGCCGACCGGCTGACGATTTTGGGGCTGGGCGAGACGGTGA
GCGTGAATTTGGGTTTGAACCGGACGGCGGTGTTGTGGTCGGGTTTGATTATTGTGGCACTGATTACATCGCTGGTCATT
GTAACGGTCGGCAATATTCCGTTTATCGGGCTGGTCGTGCCGAATATCGTCAGCCGCCTGATGGGCGACAGGCTGCGCCA
AAGCCTGCCTGCGGTCGCCCTCTTGGGCGCGTCTTTGGTTTTATTGTGCGACATTATCGGACGCATGATTGTGTTTCCGT
TTGAAATTCCGGTCTCCACGGTTTTTGGTGTGTTGGGTACGGCTTTGTTTTTGTGGCTTTTGTTGAGGAAACCCGCCTAT
GCCGTCTGA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(17-316)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q5F545

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

41.86

93.478

0.391