Detailed information
Bioinformatically predicted
Overview
| Name | sepM | Type | Regulator |
| Locus tag | FGCSD_RS02955 | Genome accession | NZ_AP018726 |
| Coordinates | 560018..561055 (+) | Length | 345 a.a. |
| NCBI ID | WP_129555395.1 | Uniprot ID | - |
| Organism | Streptococcus dysgalactiae strain Kdys0611 | ||
| Function | processing of CSP (predicted from homology) Competence regulation |
||
Genomic Context
Location: 555018..566055
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| FGCSD_RS02925 (FGCSD_0517) | - | 556061..556414 (-) | 354 | WP_129555391.1 | DUF3397 domain-containing protein | - |
| FGCSD_RS02935 (FGCSD_0518) | - | 556614..557636 (+) | 1023 | WP_129555386.1 | IS30 family transposase | - |
| FGCSD_RS02940 (FGCSD_0519) | asnA | 557826..558818 (+) | 993 | WP_003061055.1 | aspartate--ammonia ligase | - |
| FGCSD_RS02945 (FGCSD_0520) | rsmD | 559011..559550 (+) | 540 | WP_129555393.1 | 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD | - |
| FGCSD_RS02950 (FGCSD_0521) | coaD | 559540..560031 (+) | 492 | WP_129555394.1 | pantetheine-phosphate adenylyltransferase | - |
| FGCSD_RS02955 (FGCSD_0522) | sepM | 560018..561055 (+) | 1038 | WP_129555395.1 | SepM family pheromone-processing serine protease | Regulator |
| FGCSD_RS02960 (FGCSD_0523) | - | 561336..562319 (+) | 984 | WP_003051900.1 | LacI family DNA-binding transcriptional regulator | - |
| FGCSD_RS02965 (FGCSD_0524) | rbsK | 562312..563223 (+) | 912 | WP_129555396.1 | ribokinase | - |
| FGCSD_RS02970 (FGCSD_0525) | rbsD | 563198..563596 (+) | 399 | WP_003051896.1 | D-ribose pyranase | - |
| FGCSD_RS02975 (FGCSD_0526) | - | 563612..565090 (+) | 1479 | WP_129555397.1 | sugar ABC transporter ATP-binding protein | - |
| FGCSD_RS02980 (FGCSD_0527) | rbsC | 565092..566033 (+) | 942 | WP_037584987.1 | ribose ABC transporter permease | - |
Sequence
Protein
Download Length: 345 a.a. Molecular weight: 37565.13 Da Isoelectric Point: 9.5392
>NTDB_id=70577 FGCSD_RS02955 WP_129555395.1 560018..561055(+) (sepM) [Streptococcus dysgalactiae strain Kdys0611]
MKTIKKIKWWLISLIALVALLIILFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDVSKDSTFKGALNLADTVTGVNNK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKNGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALTYLRQ
MKTIKKIKWWLISLIALVALLIILFFPLPYYVEMPGGAYDIRSVVKVNGKEDKDKGSYQFVAVSLSRASLAQLLYAWLTP
FTEISSVEDTTGGYSDADYIRINQFYMETSQNAAVYQALTLADKPVTLDYKGVYVLDVSKDSTFKGALNLADTVTGVNNK
QFTSSTELVDYVSHLKLGDKVTVQFISNSEPKSETGRIIKLKNGKNGIGIALTDHTKVNSADKIEFSTQGVGGPSAGLMF
TLDIYDQINKEDLRKGRHIAGTGTIGKNGEVGDIGGAGLKVVAAADAGAEIFFVPNNPVDKAVKKANPKAISNYEEAKRA
AKQLKTKMKIVPVTTVQDALTYLRQ
Nucleotide
Download Length: 1038 bp
>NTDB_id=70577 FGCSD_RS02955 WP_129555395.1 560018..561055(+) (sepM) [Streptococcus dysgalactiae strain Kdys0611]
ATGAAAACGATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCATCCTCTTTTTCCC
TCTTCCTTACTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGACACCACAGGCGGTTACAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTCT
ATGTGTTAGATGTTAGCAAGGATTCAACCTTTAAAGGTGCTTTAAACTTAGCAGATACGGTAACGGGAGTGAATAACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGCGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGTGGTCCTAGCGCAGGCTTAATGTTT
ACACTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGAACAGGAACCATTGGTAA
AAATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAACCTACCTTCGTCAATAA
ATGAAAACGATTAAAAAAATTAAATGGTGGCTGATTAGCCTAATTGCCCTCGTGGCTCTGCTTATCATCCTCTTTTTCCC
TCTTCCTTACTATGTTGAAATGCCTGGCGGAGCCTATGACATTCGATCTGTGGTCAAGGTTAATGGCAAAGAAGATAAAG
ATAAAGGCTCCTATCAGTTTGTGGCAGTCAGTCTCAGTCGAGCCAGTTTAGCTCAGTTGCTCTATGCTTGGCTAACCCCT
TTTACTGAAATCAGTTCAGTTGAGGACACCACAGGCGGTTACAGCGATGCAGACTATATCCGCATTAATCAATTCTACAT
GGAAACCTCACAAAATGCTGCGGTCTATCAGGCATTGACCTTGGCAGACAAACCAGTTACTTTGGACTACAAAGGGGTCT
ATGTGTTAGATGTTAGCAAGGATTCAACCTTTAAAGGTGCTTTAAACTTAGCAGATACGGTAACGGGAGTGAATAACAAA
CAATTTACGAGTTCAACAGAACTTGTGGACTATGTCTCTCATTTAAAACTTGGCGATAAGGTGACTGTGCAGTTTATTAG
TAATAGCGAACCTAAGTCTGAAACAGGTCGTATCATCAAACTAAAAAATGGTAAAAATGGTATCGGCATTGCTTTAACAG
ACCATACTAAAGTCAATTCAGCAGACAAAATCGAGTTTAGTACCCAAGGTGTTGGTGGTCCTAGCGCAGGCTTAATGTTT
ACACTAGATATCTACGACCAAATTAATAAAGAAGACCTTCGTAAAGGAAGACATATCGCCGGAACAGGAACCATTGGTAA
AAATGGTGAAGTTGGAGATATTGGCGGTGCGGGTCTTAAGGTCGTTGCTGCTGCAGATGCTGGTGCTGAGATTTTCTTTG
TGCCGAATAATCCTGTGGATAAAGCTGTTAAAAAAGCCAATCCAAAAGCTATTAGCAATTATGAAGAGGCCAAGCGAGCA
GCCAAGCAGTTAAAAACAAAAATGAAAATTGTTCCTGTAACAACTGTTCAGGATGCCCTAACCTACCTTCGTCAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| sepM | Streptococcus mutans UA159 |
71.594 |
100 |
0.716 |