Detailed information    

insolico Bioinformatically predicted

Overview

Name   pptA   Type   Regulator
Locus tag   NLY76_RS08665 Genome accession   NZ_CP100430
Coordinates   1778856..1779590 (-) Length   244 a.a.
NCBI ID   WP_044686658.1    Uniprot ID   A0A0Z8HUJ7
Organism   Streptococcus suis strain LSS42     
Function   export ComS (predicted from homology)   
Competence regulation

Genomic Context

Location: 1773856..1784590
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  NLY76_RS08635 (NLY76_08635) - 1774084..1774380 (-) 297 WP_002942375.1 YlxR family protein -
  NLY76_RS08640 (NLY76_08640) nusA 1774397..1775539 (-) 1143 WP_004194726.1 transcription termination factor NusA -
  NLY76_RS08645 (NLY76_08645) rimP 1775612..1776082 (-) 471 WP_044757671.1 ribosome maturation factor RimP -
  NLY76_RS08650 (NLY76_08650) trmB 1776340..1776978 (-) 639 WP_044757670.1 tRNA (guanosine(46)-N7)-methyltransferase TrmB -
  NLY76_RS08655 (NLY76_08655) ccrZ 1776975..1777769 (-) 795 WP_002942360.1 cell cycle regulator CcrZ -
  NLY76_RS08660 (NLY76_08660) - 1777819..1778859 (-) 1041 WP_024395378.1 ABC transporter permease -
  NLY76_RS08665 (NLY76_08665) pptA 1778856..1779590 (-) 735 WP_044686658.1 ABC transporter ATP-binding protein Regulator
  NLY76_RS08670 (NLY76_08670) - 1779653..1780066 (+) 414 WP_044686659.1 HIT family protein -
  NLY76_RS08675 (NLY76_08675) - 1780068..1780370 (+) 303 WP_044686661.1 hypothetical protein -
  NLY76_RS08680 (NLY76_08680) - 1780480..1781673 (-) 1194 WP_044686662.1 LCP family protein -
  NLY76_RS08685 (NLY76_08685) - 1781670..1782197 (-) 528 WP_002939196.1 GNAT family N-acetyltransferase -
  NLY76_RS08690 (NLY76_08690) tsaE 1782190..1782630 (-) 441 WP_024376437.1 tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE -
  NLY76_RS08695 (NLY76_08695) - 1782731..1784395 (-) 1665 WP_044677646.1 DAK2 domain-containing protein -

Sequence

Protein


Download         Length: 244 a.a.        Molecular weight: 26861.15 Da        Isoelectric Point: 4.4056

>NTDB_id=705223 NLY76_RS08665 WP_044686658.1 1778856..1779590(-) (pptA) [Streptococcus suis strain LSS42]
MLEVKNVTGGYVNIPVLKDVSFTVEDGQLVGLIGLNGAGKSTTIKEIIGLLTPYQGQIAINGLTLLQGAENYRKKIGFIP
ETPSLYEELTLKEHLEVVAMAYDLSWEQAWGRVEHLLKLFRLDEKLDWFPVNFSKGMKQKVMIICAFMVEPSLLIVDEPF
LGLDPVAISDLIALLEEEKSKGTSILMSTHVLDSAEKMCDSFVILHQGQVRATGNLEELQSTFGMDGASLNEIYLALTQE
GVAG

Nucleotide


Download         Length: 735 bp        

>NTDB_id=705223 NLY76_RS08665 WP_044686658.1 1778856..1779590(-) (pptA) [Streptococcus suis strain LSS42]
ATGTTAGAAGTAAAAAATGTAACTGGAGGATATGTCAATATCCCAGTTTTGAAAGATGTATCTTTTACCGTTGAGGATGG
TCAATTAGTTGGTCTAATTGGTTTAAATGGTGCAGGGAAATCAACGACTATTAAGGAAATTATCGGTCTTTTGACACCTT
ATCAAGGACAGATTGCAATTAACGGCCTAACTTTGCTACAAGGGGCTGAAAATTATCGGAAGAAGATTGGGTTTATCCCT
GAAACACCAAGTTTGTATGAAGAACTAACCCTCAAAGAGCACTTGGAAGTGGTAGCAATGGCCTATGATTTATCCTGGGA
GCAAGCTTGGGGACGTGTTGAGCACTTGTTAAAACTGTTTCGCTTGGATGAGAAATTGGACTGGTTTCCTGTTAATTTTT
CAAAGGGAATGAAGCAGAAGGTCATGATTATTTGTGCTTTTATGGTGGAGCCGAGTCTGTTGATTGTTGATGAGCCTTTT
CTGGGATTAGACCCTGTGGCTATCTCTGACTTGATCGCTCTTTTGGAGGAAGAAAAATCTAAGGGCACTTCAATCCTCAT
GTCCACTCACGTTCTTGACTCAGCTGAGAAAATGTGCGACTCTTTTGTGATTTTACATCAGGGACAGGTTCGTGCAACTG
GAAATTTGGAGGAGCTACAAAGCACATTTGGTATGGATGGTGCAAGTCTGAATGAAATTTATCTGGCCTTGACGCAAGAA
GGAGTGGCTGGATGA

Domains

Predicted by InterproScan.

ABC transporter (ABC_tran)

(17-160)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A0Z8HUJ7

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pptA Streptococcus salivarius strain HSISS4

75.314

97.951

0.738
  pptA Streptococcus thermophilus LMD-9

73.64

97.951

0.721