Detailed information    

insolico Bioinformatically predicted

Overview

Name   ceuB   Type   Machinery gene
Locus tag   PF449_RS13385 Genome accession   NZ_CP115623
Coordinates   2781770..2782711 (-) Length   313 a.a.
NCBI ID   WP_031961018.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain 2022CK-00340     
Function   DNA uptake (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 2776770..2787711
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  PF449_RS13370 (PF449_13370) bauB 2779081..2780049 (-) 969 WP_001104128.1 siderophore-binding periplasmic lipoprotein BauB -
  PF449_RS13375 (PF449_13375) bauE 2780056..2780826 (-) 771 WP_000582117.1 ferric acinetobactin ABC transporter ATP-binding protein BauE -
  PF449_RS13380 (PF449_13380) bauC 2780823..2781770 (-) 948 WP_031961017.1 ferric acinetobactin ABC transporter permease subunit BauC -
  PF449_RS13385 (PF449_13385) ceuB 2781770..2782711 (-) 942 WP_031961018.1 ferric acinetobactin ABC transporter permease subunit BauD Machinery gene
  PF449_RS13390 (PF449_13390) - 2782711..2782842 (-) 132 WP_001218004.1 hypothetical protein -
  PF449_RS13395 (PF449_13395) basB 2783342..2785369 (+) 2028 WP_281716565.1 acinetobactin non-ribosomal peptide synthetase subunit BasB -
  PF449_RS13400 (PF449_13400) basA 2785440..2787287 (-) 1848 WP_031961022.1 acinetobactin non-ribosomal peptide synthetase subunit BasA -

Sequence

Protein


Download         Length: 313 a.a.        Molecular weight: 34057.10 Da        Isoelectric Point: 8.4665

>NTDB_id=705170 PF449_RS13385 WP_031961018.1 2781770..2782711(-) (ceuB) [Acinetobacter baumannii strain 2022CK-00340]
MQFGLFCIFIILCICSLLLGAEQIQWSTLFSFSHESWLTLTASRIPRLITIVLTGIGLAVCGFILQHIVRNKFVEPETSG
GLDAAKLGILVSLTLVPVTSTLSKMIFAIIFCFIASLIYIAIIRRIRFRNTVLVPVIGLMYGSVLSALAEFYAYRFNILQ
SMQGWLLGDFSKIVQGHYEVIYIIFPIVVLTYLFAHRFTVIGMGEEMASSLGLSYATIAAIGLILVAITVSTTVITVGAI
PFVGLVVPNLVALKYGENLAKTLPIVALGGASLLLICDILGRSIIYPFEVPIGLTAGGVGGIIFLILILREFR

Nucleotide


Download         Length: 942 bp        

>NTDB_id=705170 PF449_RS13385 WP_031961018.1 2781770..2782711(-) (ceuB) [Acinetobacter baumannii strain 2022CK-00340]
ATGCAATTCGGCTTATTCTGTATTTTTATCATTTTATGTATTTGCTCATTATTGCTCGGGGCTGAACAAATACAGTGGTC
TACCTTATTTTCTTTTTCTCATGAGAGTTGGCTCACTCTTACAGCCAGCCGTATTCCTCGTTTAATTACTATTGTGCTTA
CCGGTATCGGGTTGGCGGTATGTGGCTTCATCTTGCAGCATATTGTGCGTAACAAGTTTGTTGAACCGGAAACATCGGGT
GGTTTAGATGCTGCCAAACTGGGAATTTTAGTGTCATTAACTTTAGTTCCGGTAACCAGCACGTTGAGCAAGATGATATT
TGCGATCATTTTTTGTTTTATTGCCAGCTTAATTTATATCGCAATTATTCGCCGGATCCGTTTTAGAAATACGGTTTTAG
TACCGGTTATTGGTTTGATGTACGGCAGTGTACTGAGTGCCTTAGCTGAGTTTTATGCCTATCGCTTTAATATTTTACAA
AGTATGCAAGGGTGGCTTTTAGGAGATTTTTCAAAAATTGTCCAAGGCCACTATGAAGTTATTTACATTATTTTTCCGAT
TGTTGTCCTGACTTATCTTTTTGCACACCGCTTTACCGTAATTGGTATGGGGGAAGAGATGGCTTCTAGCTTAGGACTCA
GTTATGCGACTATAGCCGCCATTGGTTTGATACTGGTTGCTATTACAGTTTCGACCACAGTAATTACGGTTGGTGCTATT
CCTTTTGTCGGGCTCGTGGTCCCCAATTTAGTCGCACTGAAATACGGAGAAAACTTAGCTAAAACCTTGCCGATTGTAGC
GTTGGGTGGGGCGTCTCTATTACTGATTTGCGACATTCTTGGTCGCTCAATTATTTACCCATTTGAAGTGCCAATTGGAC
TTACCGCAGGTGGTGTAGGGGGAATTATTTTCCTCATCCTCATTTTGAGGGAGTTCAGATAA

Domains

Predicted by InterProScan.

FecCD transport family (FecCD)

(9-310)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ceuB Campylobacter jejuni subsp. jejuni 81-176

44.257

94.569

0.419